Gene : Phvul.002G202200 P. vulgaris v2.1
Defline:  (1 of 16) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  2001
Name:  ? Phvul.002G202200 Secondary Identifier:  ? PAC:37178125
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G202200 0.5kb upstream 0.5kb upstream 2268 true Chr02: 36853230-36855497 Phaseolus vulgaris
Phvul.002G202200 0.5kb upstream 0.5kb upstream 500 false Chr02: 36854998-36855497 Phaseolus vulgaris
Phvul.002G202200 0.5kb downstream 0.5kb downstream 2268 true Chr02: 36852730-36854997 Phaseolus vulgaris
Phvul.002G202200 0.5kb downstream 0.5kb downstream 500 false Chr02: 36852730-36853229 Phaseolus vulgaris
Phvul.002G202200 1.0kb upstream 1.0kb upstream 2768 true Chr02: 36853230-36855997 Phaseolus vulgaris
Phvul.002G202200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 36854998-36855997 Phaseolus vulgaris
Phvul.002G202200 1.0kb downstream 1.0kb downstream 2768 true Chr02: 36852230-36854997 Phaseolus vulgaris
Phvul.002G202200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 36852230-36853229 Phaseolus vulgaris
Phvul.002G202200 2.0kb upstream 2.0kb upstream 3768 true Chr02: 36853230-36856997 Phaseolus vulgaris
Phvul.002G202200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 36854998-36856997 Phaseolus vulgaris
Phvul.002G202200 2.0kb downstream 2.0kb downstream 3768 true Chr02: 36851230-36854997 Phaseolus vulgaris
Phvul.002G202200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 36851230-36853229 Phaseolus vulgaris
Phvul.002G202200 5.0kb upstream 5.0kb upstream 6768 true Chr02: 36853230-36859997 Phaseolus vulgaris
Phvul.002G202200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 36854998-36859997 Phaseolus vulgaris
Phvul.002G202200 5.0kb downstream 5.0kb downstream 6768 true Chr02: 36848230-36854997 Phaseolus vulgaris
Phvul.002G202200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 36848230-36853229 Phaseolus vulgaris
Phvul.002G202200 10.0kb upstream 10.0kb upstream 11768 true Chr02: 36853230-36864997 Phaseolus vulgaris
Phvul.002G202200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 36854998-36864997 Phaseolus vulgaris
Phvul.002G202200 10.0kb downstream 10.0kb downstream 11768 true Chr02: 36843230-36854997 Phaseolus vulgaris
Phvul.002G202200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 36843230-36853229 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310489 5265 Fabidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5643 0.0 38.4436    
cufflinks 10.7411 0.0 29.0523    
cufflinks 1.31471 0.0 4.45623    
cufflinks 2.50479 0.0 7.78936    
cufflinks 16.7636 0.0 43.8079   High
cufflinks 0.788362 0.0 2.8144   Low
cufflinks 3.1058 0.0 9.44074    
cufflinks 0.44146 0.0 1.65458 Low Low
cufflinks 1.22566 0.0 4.15048    
cufflinks 15.9651 0.0 41.9308   High
cufflinks 13.8875 0.0 36.7155    

0 Strain