Gene : Phvul.002G203400 P. vulgaris v2.1
Defline:  (1 of 1) K14769 - U3 small nucleolar RNA-associated protein 11 (UTP11) Genomic Order:  2012
Name:  ? Phvul.002G203400 Secondary Identifier:  ? PAC:37176427
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G203400 0.5kb upstream 0.5kb upstream 4972 true Chr02: 36998951-37003922 Phaseolus vulgaris
Phvul.002G203400 0.5kb upstream 0.5kb upstream 500 false Chr02: 36998951-36999450 Phaseolus vulgaris
Phvul.002G203400 0.5kb downstream 0.5kb downstream 4972 true Chr02: 36999451-37004422 Phaseolus vulgaris
Phvul.002G203400 0.5kb downstream 0.5kb downstream 500 false Chr02: 37003923-37004422 Phaseolus vulgaris
Phvul.002G203400 1.0kb upstream 1.0kb upstream 5472 true Chr02: 36998451-37003922 Phaseolus vulgaris
Phvul.002G203400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 36998451-36999450 Phaseolus vulgaris
Phvul.002G203400 1.0kb downstream 1.0kb downstream 5472 true Chr02: 36999451-37004922 Phaseolus vulgaris
Phvul.002G203400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37003923-37004922 Phaseolus vulgaris
Phvul.002G203400 2.0kb upstream 2.0kb upstream 6472 true Chr02: 36997451-37003922 Phaseolus vulgaris
Phvul.002G203400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 36997451-36999450 Phaseolus vulgaris
Phvul.002G203400 2.0kb downstream 2.0kb downstream 6472 true Chr02: 36999451-37005922 Phaseolus vulgaris
Phvul.002G203400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37003923-37005922 Phaseolus vulgaris
Phvul.002G203400 5.0kb upstream 5.0kb upstream 9472 true Chr02: 36994451-37003922 Phaseolus vulgaris
Phvul.002G203400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 36994451-36999450 Phaseolus vulgaris
Phvul.002G203400 5.0kb downstream 5.0kb downstream 9472 true Chr02: 36999451-37008922 Phaseolus vulgaris
Phvul.002G203400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37003923-37008922 Phaseolus vulgaris
Phvul.002G203400 10.0kb upstream 10.0kb upstream 14472 true Chr02: 36989451-37003922 Phaseolus vulgaris
Phvul.002G203400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 36989451-36999450 Phaseolus vulgaris
Phvul.002G203400 10.0kb downstream 10.0kb downstream 14472 true Chr02: 36999451-37013922 Phaseolus vulgaris
Phvul.002G203400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37003923-37013922 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026243 5273 Angiosperm View MSA
122301555 5265 Fabidae View MSA
124062560 5270 Rosid View MSA
123737231 5271 Pentapetalae View MSA
122787180 5272 Eudicot View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5192 0.0 49.5347   High
cufflinks 15.9363 0.0 43.0396    
cufflinks 14.5517 0.0 39.514    
cufflinks 13.6879 0.0 37.7422    
cufflinks 9.70922 0.0 27.7056   Low
cufflinks 10.1179 0.0 28.4069   Low
cufflinks 13.0883 0.0 35.8797    
cufflinks 17.943 0.0 47.7371   High
cufflinks 13.5372 0.0 37.0017    
cufflinks 11.067 0.0 30.9403    
cufflinks 13.1517 0.0 36.2647    

0 Strain