Gene : Phvul.002G193600 P. vulgaris v2.1
Defline:  (1 of 1) K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) Genomic Order:  1916
Name:  ? Phvul.002G193600 Secondary Identifier:  ? PAC:37176594
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G193600 0.5kb upstream 0.5kb upstream 4426 true Chr02: 35766323-35770748 Phaseolus vulgaris
Phvul.002G193600 0.5kb upstream 0.5kb upstream 500 false Chr02: 35770249-35770748 Phaseolus vulgaris
Phvul.002G193600 0.5kb downstream 0.5kb downstream 4426 true Chr02: 35765823-35770248 Phaseolus vulgaris
Phvul.002G193600 0.5kb downstream 0.5kb downstream 500 false Chr02: 35765823-35766322 Phaseolus vulgaris
Phvul.002G193600 1.0kb upstream 1.0kb upstream 4926 true Chr02: 35766323-35771248 Phaseolus vulgaris
Phvul.002G193600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35770249-35771248 Phaseolus vulgaris
Phvul.002G193600 1.0kb downstream 1.0kb downstream 4926 true Chr02: 35765323-35770248 Phaseolus vulgaris
Phvul.002G193600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35765323-35766322 Phaseolus vulgaris
Phvul.002G193600 2.0kb upstream 2.0kb upstream 5926 true Chr02: 35766323-35772248 Phaseolus vulgaris
Phvul.002G193600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35770249-35772248 Phaseolus vulgaris
Phvul.002G193600 2.0kb downstream 2.0kb downstream 5926 true Chr02: 35764323-35770248 Phaseolus vulgaris
Phvul.002G193600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35764323-35766322 Phaseolus vulgaris
Phvul.002G193600 5.0kb upstream 5.0kb upstream 8926 true Chr02: 35766323-35775248 Phaseolus vulgaris
Phvul.002G193600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35770249-35775248 Phaseolus vulgaris
Phvul.002G193600 5.0kb downstream 5.0kb downstream 8926 true Chr02: 35761323-35770248 Phaseolus vulgaris
Phvul.002G193600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35761323-35766322 Phaseolus vulgaris
Phvul.002G193600 10.0kb upstream 10.0kb upstream 13926 true Chr02: 35766323-35780248 Phaseolus vulgaris
Phvul.002G193600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35770249-35780248 Phaseolus vulgaris
Phvul.002G193600 10.0kb downstream 10.0kb downstream 13926 true Chr02: 35756323-35770248 Phaseolus vulgaris
Phvul.002G193600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35756323-35766322 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303229 5265 Fabidae View MSA
124066331 5270 Rosid View MSA
123736511 5271 Pentapetalae View MSA
122789999 5272 Eudicot View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.5334 0.0 99.8851    
cufflinks 26.9748 0.0 97.9243    
cufflinks 28.0677 0.0 101.16    
cufflinks 38.0595 0.0 135.411 High High
cufflinks 18.8363 0.0 73.8603    
cufflinks 22.2401 0.0 82.8029    
cufflinks 21.3098 0.0 72.6659    
cufflinks 22.9121 0.0 76.563    
cufflinks 17.3966 0.0 63.8042   Low
cufflinks 18.2531 0.0 72.1414   Low
cufflinks 24.9992 0.0 92.4438    

0 Strain