Gene : Phvul.002G187000 P. vulgaris v2.1
Defline:  (1 of 1) PF07719//PF13371 - Tetratricopeptide repeat (TPR_2) // Tetratricopeptide repeat (TPR_9) Genomic Order:  1848
Name:  ? Phvul.002G187000 Secondary Identifier:  ? PAC:37174736
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G187000 0.5kb upstream 0.5kb upstream 1779 true Chr02: 34968510-34970288 Phaseolus vulgaris
Phvul.002G187000 0.5kb upstream 0.5kb upstream 500 false Chr02: 34968510-34969009 Phaseolus vulgaris
Phvul.002G187000 0.5kb downstream 0.5kb downstream 1779 true Chr02: 34969010-34970788 Phaseolus vulgaris
Phvul.002G187000 0.5kb downstream 0.5kb downstream 500 false Chr02: 34970289-34970788 Phaseolus vulgaris
Phvul.002G187000 1.0kb upstream 1.0kb upstream 2279 true Chr02: 34968010-34970288 Phaseolus vulgaris
Phvul.002G187000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 34968010-34969009 Phaseolus vulgaris
Phvul.002G187000 1.0kb downstream 1.0kb downstream 2279 true Chr02: 34969010-34971288 Phaseolus vulgaris
Phvul.002G187000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 34970289-34971288 Phaseolus vulgaris
Phvul.002G187000 2.0kb upstream 2.0kb upstream 3279 true Chr02: 34967010-34970288 Phaseolus vulgaris
Phvul.002G187000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 34967010-34969009 Phaseolus vulgaris
Phvul.002G187000 2.0kb downstream 2.0kb downstream 3279 true Chr02: 34969010-34972288 Phaseolus vulgaris
Phvul.002G187000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 34970289-34972288 Phaseolus vulgaris
Phvul.002G187000 5.0kb upstream 5.0kb upstream 6279 true Chr02: 34964010-34970288 Phaseolus vulgaris
Phvul.002G187000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34964010-34969009 Phaseolus vulgaris
Phvul.002G187000 5.0kb downstream 5.0kb downstream 6279 true Chr02: 34969010-34975288 Phaseolus vulgaris
Phvul.002G187000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 34970289-34975288 Phaseolus vulgaris
Phvul.002G187000 10.0kb upstream 10.0kb upstream 11279 true Chr02: 34959010-34970288 Phaseolus vulgaris
Phvul.002G187000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34959010-34969009 Phaseolus vulgaris
Phvul.002G187000 10.0kb downstream 10.0kb downstream 11279 true Chr02: 34969010-34980288 Phaseolus vulgaris
Phvul.002G187000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 34970289-34980288 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308255 5265 Fabidae View MSA
124064728 5270 Rosid View MSA
123741274 5271 Pentapetalae View MSA
122788681 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.2947 0.0 86.0984 High  
cufflinks 51.5631 0.0 134.996 High  
cufflinks 43.9004 0.0 113.854 High  
cufflinks 78.8355 0.0 213.884 High High
cufflinks 35.1703 0.0 91.0634 High  
cufflinks 42.0685 0.0 109.216 High  
cufflinks 26.0197 0.0 67.2675   Low
cufflinks 37.4208 0.0 96.8737 High  
cufflinks 30.3944 0.0 78.5867 High  
cufflinks 33.6834 0.0 87.1009    
cufflinks 35.9833 0.0 93.245 High  

0 Strain