Gene : Phvul.002G305200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10509//PTHR10509:SF29 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3041
Name:  ? Phvul.002G305200 Secondary Identifier:  ? PAC:37175613
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1121 Phaseolus vulgaris pathologic  
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G305200 0.5kb upstream 0.5kb upstream 2434 true Chr02: 47346938-47349371 Phaseolus vulgaris
Phvul.002G305200 0.5kb upstream 0.5kb upstream 500 false Chr02: 47346938-47347437 Phaseolus vulgaris
Phvul.002G305200 0.5kb downstream 0.5kb downstream 2434 true Chr02: 47347438-47349871 Phaseolus vulgaris
Phvul.002G305200 0.5kb downstream 0.5kb downstream 500 false Chr02: 47349372-47349871 Phaseolus vulgaris
Phvul.002G305200 1.0kb upstream 1.0kb upstream 2934 true Chr02: 47346438-47349371 Phaseolus vulgaris
Phvul.002G305200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47346438-47347437 Phaseolus vulgaris
Phvul.002G305200 1.0kb downstream 1.0kb downstream 2934 true Chr02: 47347438-47350371 Phaseolus vulgaris
Phvul.002G305200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47349372-47350371 Phaseolus vulgaris
Phvul.002G305200 2.0kb upstream 2.0kb upstream 3934 true Chr02: 47345438-47349371 Phaseolus vulgaris
Phvul.002G305200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47345438-47347437 Phaseolus vulgaris
Phvul.002G305200 2.0kb downstream 2.0kb downstream 3934 true Chr02: 47347438-47351371 Phaseolus vulgaris
Phvul.002G305200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47349372-47351371 Phaseolus vulgaris
Phvul.002G305200 5.0kb upstream 5.0kb upstream 6934 true Chr02: 47342438-47349371 Phaseolus vulgaris
Phvul.002G305200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47342438-47347437 Phaseolus vulgaris
Phvul.002G305200 5.0kb downstream 5.0kb downstream 6934 true Chr02: 47347438-47354371 Phaseolus vulgaris
Phvul.002G305200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47349372-47354371 Phaseolus vulgaris
Phvul.002G305200 10.0kb upstream 10.0kb upstream 11934 true Chr02: 47337438-47349371 Phaseolus vulgaris
Phvul.002G305200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47337438-47347437 Phaseolus vulgaris
Phvul.002G305200 10.0kb downstream 10.0kb downstream 11934 true Chr02: 47347438-47359371 Phaseolus vulgaris
Phvul.002G305200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47349372-47359371 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314949 5265 Fabidae View MSA
124070229 5270 Rosid View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4139 0.0 61.917   High
cufflinks 1.88391 0.0 6.46881    
cufflinks 1.00831 0.0 3.67809    
cufflinks 594.015 0.0 1984.55 High High
cufflinks 0.24191 0.0 0.99559 Low  
cufflinks 1.60622 0.0 5.60979    
cufflinks 0.0780228 0.0 0.355237 Low Low
cufflinks 0.223809 0.0 0.920881 Low  
cufflinks 0.170395 0.0 0.720518 Low  
cufflinks 0.746372 0.0 2.8    
cufflinks 0.180725 0.0 0.762108 Low  

0 Strain