Gene : Phvul.002G307900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33172:SF2 - EMB Genomic Order:  3068
Name:  ? Phvul.002G307900 Secondary Identifier:  ? PAC:37177579
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G307900 0.5kb upstream 0.5kb upstream 2837 true Chr02: 47574154-47576990 Phaseolus vulgaris
Phvul.002G307900 0.5kb upstream 0.5kb upstream 500 false Chr02: 47574154-47574653 Phaseolus vulgaris
Phvul.002G307900 0.5kb downstream 0.5kb downstream 2837 true Chr02: 47574654-47577490 Phaseolus vulgaris
Phvul.002G307900 0.5kb downstream 0.5kb downstream 500 false Chr02: 47576991-47577490 Phaseolus vulgaris
Phvul.002G307900 1.0kb upstream 1.0kb upstream 3337 true Chr02: 47573654-47576990 Phaseolus vulgaris
Phvul.002G307900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47573654-47574653 Phaseolus vulgaris
Phvul.002G307900 1.0kb downstream 1.0kb downstream 3337 true Chr02: 47574654-47577990 Phaseolus vulgaris
Phvul.002G307900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47576991-47577990 Phaseolus vulgaris
Phvul.002G307900 2.0kb upstream 2.0kb upstream 4337 true Chr02: 47572654-47576990 Phaseolus vulgaris
Phvul.002G307900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47572654-47574653 Phaseolus vulgaris
Phvul.002G307900 2.0kb downstream 2.0kb downstream 4337 true Chr02: 47574654-47578990 Phaseolus vulgaris
Phvul.002G307900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47576991-47578990 Phaseolus vulgaris
Phvul.002G307900 5.0kb upstream 5.0kb upstream 7337 true Chr02: 47569654-47576990 Phaseolus vulgaris
Phvul.002G307900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47569654-47574653 Phaseolus vulgaris
Phvul.002G307900 5.0kb downstream 5.0kb downstream 7337 true Chr02: 47574654-47581990 Phaseolus vulgaris
Phvul.002G307900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47576991-47581990 Phaseolus vulgaris
Phvul.002G307900 10.0kb upstream 10.0kb upstream 12337 true Chr02: 47564654-47576990 Phaseolus vulgaris
Phvul.002G307900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47564654-47574653 Phaseolus vulgaris
Phvul.002G307900 10.0kb downstream 10.0kb downstream 12337 true Chr02: 47574654-47586990 Phaseolus vulgaris
Phvul.002G307900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47576991-47586990 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311637 5265 Fabidae View MSA
124074077 5270 Rosid View MSA
123750402 5271 Pentapetalae View MSA
122795824 5272 Eudicot View MSA
122046186 5273 Angiosperm View MSA
121310570 5274 Embryophyte View MSA
123348021 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32606 0.0 10.2376   High
cufflinks 0.984099 0.0 3.47994    
cufflinks 1.01352 0.0 3.54921    
cufflinks 0.907957 0.0 3.26279    
cufflinks 0.870745 0.0 3.14436    
cufflinks 0.121714 0.0 0.511597 Low Low
cufflinks 0.380622 0.0 1.46396 Low  
cufflinks 0.0555705 0.0 0.250284 Low Low
cufflinks 1.82801 0.0 6.07635    
cufflinks 0.613904 0.0 2.26882    
cufflinks 0.257338 0.0 1.0253 Low  

0 Strain