Gene : Phvul.002G297900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  2965
Name:  ? Phvul.002G297900 Secondary Identifier:  ? PAC:37178544
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Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-162 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6545 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7176 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7184 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7196 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7197 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7200 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7205 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7208 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7210 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7211 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7221 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7224 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7226 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7227 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7228 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7229 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G297900 0.5kb upstream 0.5kb upstream 3423 true Chr02: 46640851-46644273 Phaseolus vulgaris
Phvul.002G297900 0.5kb upstream 0.5kb upstream 500 false Chr02: 46643774-46644273 Phaseolus vulgaris
Phvul.002G297900 0.5kb downstream 0.5kb downstream 3423 true Chr02: 46640351-46643773 Phaseolus vulgaris
Phvul.002G297900 0.5kb downstream 0.5kb downstream 500 false Chr02: 46640351-46640850 Phaseolus vulgaris
Phvul.002G297900 1.0kb upstream 1.0kb upstream 3923 true Chr02: 46640851-46644773 Phaseolus vulgaris
Phvul.002G297900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46643774-46644773 Phaseolus vulgaris
Phvul.002G297900 1.0kb downstream 1.0kb downstream 3923 true Chr02: 46639851-46643773 Phaseolus vulgaris
Phvul.002G297900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46639851-46640850 Phaseolus vulgaris
Phvul.002G297900 2.0kb upstream 2.0kb upstream 4923 true Chr02: 46640851-46645773 Phaseolus vulgaris
Phvul.002G297900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46643774-46645773 Phaseolus vulgaris
Phvul.002G297900 2.0kb downstream 2.0kb downstream 4923 true Chr02: 46638851-46643773 Phaseolus vulgaris
Phvul.002G297900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46638851-46640850 Phaseolus vulgaris
Phvul.002G297900 5.0kb upstream 5.0kb upstream 7923 true Chr02: 46640851-46648773 Phaseolus vulgaris
Phvul.002G297900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46643774-46648773 Phaseolus vulgaris
Phvul.002G297900 5.0kb downstream 5.0kb downstream 7923 true Chr02: 46635851-46643773 Phaseolus vulgaris
Phvul.002G297900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46635851-46640850 Phaseolus vulgaris
Phvul.002G297900 10.0kb upstream 10.0kb upstream 12923 true Chr02: 46640851-46653773 Phaseolus vulgaris
Phvul.002G297900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46643774-46653773 Phaseolus vulgaris
Phvul.002G297900 10.0kb downstream 10.0kb downstream 12923 true Chr02: 46630851-46643773 Phaseolus vulgaris
Phvul.002G297900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46630851-46640850 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312585 5265 Fabidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 139.513 0.0 388.175 High  
cufflinks 93.8169 0.0 251.631 High  
cufflinks 152.841 0.0 429.111 High  
cufflinks 676.901 0.0 2447.06 High High
cufflinks 53.9711 0.0 140.079 High  
cufflinks 81.759 0.0 216.878 High  
cufflinks 46.927 0.0 121.553 High  
cufflinks 67.2067 0.0 176.226 High  
cufflinks 92.3311 0.0 247.299 High  
cufflinks 30.3814 0.0 78.7364   Low
cufflinks 56.7133 0.0 147.573 High  

0 Strain