Gene : Phvul.002G296200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Genomic Order:  2948
Name:  ? Phvul.002G296200 Secondary Identifier:  ? PAC:37174451
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G296200 0.5kb upstream 0.5kb upstream 3354 true Chr02: 46509275-46512628 Phaseolus vulgaris
Phvul.002G296200 0.5kb upstream 0.5kb upstream 500 false Chr02: 46509275-46509774 Phaseolus vulgaris
Phvul.002G296200 0.5kb downstream 0.5kb downstream 3354 true Chr02: 46509775-46513128 Phaseolus vulgaris
Phvul.002G296200 0.5kb downstream 0.5kb downstream 500 false Chr02: 46512629-46513128 Phaseolus vulgaris
Phvul.002G296200 1.0kb upstream 1.0kb upstream 3854 true Chr02: 46508775-46512628 Phaseolus vulgaris
Phvul.002G296200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46508775-46509774 Phaseolus vulgaris
Phvul.002G296200 1.0kb downstream 1.0kb downstream 3854 true Chr02: 46509775-46513628 Phaseolus vulgaris
Phvul.002G296200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46512629-46513628 Phaseolus vulgaris
Phvul.002G296200 2.0kb upstream 2.0kb upstream 4854 true Chr02: 46507775-46512628 Phaseolus vulgaris
Phvul.002G296200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46507775-46509774 Phaseolus vulgaris
Phvul.002G296200 2.0kb downstream 2.0kb downstream 4854 true Chr02: 46509775-46514628 Phaseolus vulgaris
Phvul.002G296200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46512629-46514628 Phaseolus vulgaris
Phvul.002G296200 5.0kb upstream 5.0kb upstream 7854 true Chr02: 46504775-46512628 Phaseolus vulgaris
Phvul.002G296200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46504775-46509774 Phaseolus vulgaris
Phvul.002G296200 5.0kb downstream 5.0kb downstream 7854 true Chr02: 46509775-46517628 Phaseolus vulgaris
Phvul.002G296200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46512629-46517628 Phaseolus vulgaris
Phvul.002G296200 10.0kb upstream 10.0kb upstream 12854 true Chr02: 46499775-46512628 Phaseolus vulgaris
Phvul.002G296200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46499775-46509774 Phaseolus vulgaris
Phvul.002G296200 10.0kb downstream 10.0kb downstream 12854 true Chr02: 46509775-46522628 Phaseolus vulgaris
Phvul.002G296200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46512629-46522628 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310408 5265 Fabidae View MSA
124073525 5270 Rosid View MSA
123749217 5271 Pentapetalae View MSA
122792770 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0175797 0.0 0.0871251 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0391063 0.0 0.181654 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain