Gene : Phvul.002G300400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11712//PTHR11712:SF283 - POLYKETIDE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2990
Name:  ? Phvul.002G300400 Secondary Identifier:  ? PAC:37175837
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G300400 0.5kb upstream 0.5kb upstream 3908 true Chr02: 46834273-46838180 Phaseolus vulgaris
Phvul.002G300400 0.5kb upstream 0.5kb upstream 500 false Chr02: 46834273-46834772 Phaseolus vulgaris
Phvul.002G300400 0.5kb downstream 0.5kb downstream 3908 true Chr02: 46834773-46838680 Phaseolus vulgaris
Phvul.002G300400 0.5kb downstream 0.5kb downstream 500 false Chr02: 46838181-46838680 Phaseolus vulgaris
Phvul.002G300400 1.0kb upstream 1.0kb upstream 4408 true Chr02: 46833773-46838180 Phaseolus vulgaris
Phvul.002G300400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46833773-46834772 Phaseolus vulgaris
Phvul.002G300400 1.0kb downstream 1.0kb downstream 4408 true Chr02: 46834773-46839180 Phaseolus vulgaris
Phvul.002G300400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46838181-46839180 Phaseolus vulgaris
Phvul.002G300400 2.0kb upstream 2.0kb upstream 5408 true Chr02: 46832773-46838180 Phaseolus vulgaris
Phvul.002G300400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46832773-46834772 Phaseolus vulgaris
Phvul.002G300400 2.0kb downstream 2.0kb downstream 5408 true Chr02: 46834773-46840180 Phaseolus vulgaris
Phvul.002G300400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46838181-46840180 Phaseolus vulgaris
Phvul.002G300400 5.0kb upstream 5.0kb upstream 8408 true Chr02: 46829773-46838180 Phaseolus vulgaris
Phvul.002G300400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46829773-46834772 Phaseolus vulgaris
Phvul.002G300400 5.0kb downstream 5.0kb downstream 8408 true Chr02: 46834773-46843180 Phaseolus vulgaris
Phvul.002G300400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46838181-46843180 Phaseolus vulgaris
Phvul.002G300400 10.0kb upstream 10.0kb upstream 13408 true Chr02: 46824773-46838180 Phaseolus vulgaris
Phvul.002G300400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46824773-46834772 Phaseolus vulgaris
Phvul.002G300400 10.0kb downstream 10.0kb downstream 13408 true Chr02: 46834773-46848180 Phaseolus vulgaris
Phvul.002G300400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46838181-46848180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791871 5273 Angiosperm View MSA
122303640 5265 Fabidae View MSA
124070381 5270 Rosid View MSA
123742517 5271 Pentapetalae View MSA
122794938 5272 Eudicot View MSA
121063147 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54241 0.0 20.5602    
cufflinks 4.65147 0.0 13.2457    
cufflinks 3.95587 0.0 11.4424    
cufflinks 42.4806 0.0 111.35 High High
cufflinks 4.81079 0.0 13.736    
cufflinks 18.6626 0.0 48.3108   High
cufflinks 5.62862 0.0 15.7231    
cufflinks 3.51875 0.0 10.276    
cufflinks 3.84744 0.0 11.1693    
cufflinks 1.17848 0.0 3.92368   Low
cufflinks 9.6878 0.0 25.9652    

0 Strain