Gene : Phvul.002G287200 P. vulgaris v2.1
Defline:  (1 of 7) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  2853
Name:  ? Phvul.002G287200 Secondary Identifier:  ? PAC:37178475
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G287200 0.5kb upstream 0.5kb upstream 7279 true Chr02: 45629568-45636846 Phaseolus vulgaris
Phvul.002G287200 0.5kb upstream 0.5kb upstream 500 false Chr02: 45629568-45630067 Phaseolus vulgaris
Phvul.002G287200 0.5kb downstream 0.5kb downstream 7279 true Chr02: 45630068-45637346 Phaseolus vulgaris
Phvul.002G287200 0.5kb downstream 0.5kb downstream 500 false Chr02: 45636847-45637346 Phaseolus vulgaris
Phvul.002G287200 1.0kb upstream 1.0kb upstream 7779 true Chr02: 45629068-45636846 Phaseolus vulgaris
Phvul.002G287200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45629068-45630067 Phaseolus vulgaris
Phvul.002G287200 1.0kb downstream 1.0kb downstream 7779 true Chr02: 45630068-45637846 Phaseolus vulgaris
Phvul.002G287200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45636847-45637846 Phaseolus vulgaris
Phvul.002G287200 2.0kb upstream 2.0kb upstream 8779 true Chr02: 45628068-45636846 Phaseolus vulgaris
Phvul.002G287200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45628068-45630067 Phaseolus vulgaris
Phvul.002G287200 2.0kb downstream 2.0kb downstream 8779 true Chr02: 45630068-45638846 Phaseolus vulgaris
Phvul.002G287200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45636847-45638846 Phaseolus vulgaris
Phvul.002G287200 5.0kb upstream 5.0kb upstream 11779 true Chr02: 45625068-45636846 Phaseolus vulgaris
Phvul.002G287200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45625068-45630067 Phaseolus vulgaris
Phvul.002G287200 5.0kb downstream 5.0kb downstream 11779 true Chr02: 45630068-45641846 Phaseolus vulgaris
Phvul.002G287200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45636847-45641846 Phaseolus vulgaris
Phvul.002G287200 10.0kb upstream 10.0kb upstream 16779 true Chr02: 45620068-45636846 Phaseolus vulgaris
Phvul.002G287200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45620068-45630067 Phaseolus vulgaris
Phvul.002G287200 10.0kb downstream 10.0kb downstream 16779 true Chr02: 45630068-45646846 Phaseolus vulgaris
Phvul.002G287200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45636847-45646846 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298981 5265 Fabidae View MSA
124064665 5270 Rosid View MSA
123740264 5271 Pentapetalae View MSA
122787104 5272 Eudicot View MSA
122046147 5273 Angiosperm View MSA
121347118 5274 Embryophyte View MSA
123426547 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00532 0.0 4.31027    
cufflinks 0.744615 0.0 3.45029    
cufflinks 18.4719 0.0 53.2675   High
cufflinks 1.28696 0.0 5.35241    
cufflinks 1.07163 0.0 4.61665    
cufflinks 5.70409 0.0 17.3064   High
cufflinks 0.718536 0.0 3.38645    
cufflinks 0.981869 0.0 4.10249    
cufflinks 0.624925 0.0 2.99277    
cufflinks 0.588177 0.0 2.90639    
cufflinks 0.948488 0.0 3.92583    

0 Strain