Gene : Phvul.002G289200 P. vulgaris v2.1
Defline:  (1 of 2) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase Genomic Order:  2876
Name:  ? Phvul.002G289200 Secondary Identifier:  ? PAC:37176905
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUTATHIONESYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-6840 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G289200 0.5kb upstream 0.5kb upstream 8994 true Chr02: 45792336-45801329 Phaseolus vulgaris
Phvul.002G289200 0.5kb upstream 0.5kb upstream 500 false Chr02: 45800830-45801329 Phaseolus vulgaris
Phvul.002G289200 0.5kb downstream 0.5kb downstream 8994 true Chr02: 45791836-45800829 Phaseolus vulgaris
Phvul.002G289200 0.5kb downstream 0.5kb downstream 500 false Chr02: 45791836-45792335 Phaseolus vulgaris
Phvul.002G289200 1.0kb upstream 1.0kb upstream 9494 true Chr02: 45792336-45801829 Phaseolus vulgaris
Phvul.002G289200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45800830-45801829 Phaseolus vulgaris
Phvul.002G289200 1.0kb downstream 1.0kb downstream 9494 true Chr02: 45791336-45800829 Phaseolus vulgaris
Phvul.002G289200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45791336-45792335 Phaseolus vulgaris
Phvul.002G289200 2.0kb upstream 2.0kb upstream 10494 true Chr02: 45792336-45802829 Phaseolus vulgaris
Phvul.002G289200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45800830-45802829 Phaseolus vulgaris
Phvul.002G289200 2.0kb downstream 2.0kb downstream 10494 true Chr02: 45790336-45800829 Phaseolus vulgaris
Phvul.002G289200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45790336-45792335 Phaseolus vulgaris
Phvul.002G289200 5.0kb upstream 5.0kb upstream 13494 true Chr02: 45792336-45805829 Phaseolus vulgaris
Phvul.002G289200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45800830-45805829 Phaseolus vulgaris
Phvul.002G289200 5.0kb downstream 5.0kb downstream 13494 true Chr02: 45787336-45800829 Phaseolus vulgaris
Phvul.002G289200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45787336-45792335 Phaseolus vulgaris
Phvul.002G289200 10.0kb upstream 10.0kb upstream 18494 true Chr02: 45792336-45810829 Phaseolus vulgaris
Phvul.002G289200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45800830-45810829 Phaseolus vulgaris
Phvul.002G289200 10.0kb downstream 10.0kb downstream 18494 true Chr02: 45782336-45800829 Phaseolus vulgaris
Phvul.002G289200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45782336-45792335 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301926 5265 Fabidae View MSA
124066026 5270 Rosid View MSA
123737554 5271 Pentapetalae View MSA
122790790 5272 Eudicot View MSA
122044028 5273 Angiosperm View MSA
121346589 5274 Embryophyte View MSA
123424300 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.5251 0.0 161.531 High High
cufflinks 36.3845 0.0 95.1718 High  
cufflinks 47.9017 0.0 127.649 High  
cufflinks 34.1956 0.0 89.0589    
cufflinks 28.1191 0.0 72.8507    
cufflinks 25.0716 0.0 64.8647   Low
cufflinks 50.7336 0.0 135.775 High  
cufflinks 32.2265 0.0 83.9512 High  
cufflinks 60.5569 0.0 164.121 High High
cufflinks 39.6428 0.0 104.106 High  
cufflinks 27.2131 0.0 70.4618   Low

0 Strain