Gene : Phvul.002G290800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14499:SF11 - PROTEIN VM106R.1 Genomic Order:  2892
Name:  ? Phvul.002G290800 Secondary Identifier:  ? PAC:37175016
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G290800 0.5kb upstream 0.5kb upstream 2280 true Chr02: 45942857-45945136 Phaseolus vulgaris
Phvul.002G290800 0.5kb upstream 0.5kb upstream 500 false Chr02: 45944637-45945136 Phaseolus vulgaris
Phvul.002G290800 0.5kb downstream 0.5kb downstream 2280 true Chr02: 45942357-45944636 Phaseolus vulgaris
Phvul.002G290800 0.5kb downstream 0.5kb downstream 500 false Chr02: 45942357-45942856 Phaseolus vulgaris
Phvul.002G290800 1.0kb upstream 1.0kb upstream 2780 true Chr02: 45942857-45945636 Phaseolus vulgaris
Phvul.002G290800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45944637-45945636 Phaseolus vulgaris
Phvul.002G290800 1.0kb downstream 1.0kb downstream 2780 true Chr02: 45941857-45944636 Phaseolus vulgaris
Phvul.002G290800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45941857-45942856 Phaseolus vulgaris
Phvul.002G290800 2.0kb upstream 2.0kb upstream 3780 true Chr02: 45942857-45946636 Phaseolus vulgaris
Phvul.002G290800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45944637-45946636 Phaseolus vulgaris
Phvul.002G290800 2.0kb downstream 2.0kb downstream 3780 true Chr02: 45940857-45944636 Phaseolus vulgaris
Phvul.002G290800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45940857-45942856 Phaseolus vulgaris
Phvul.002G290800 5.0kb upstream 5.0kb upstream 6780 true Chr02: 45942857-45949636 Phaseolus vulgaris
Phvul.002G290800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45944637-45949636 Phaseolus vulgaris
Phvul.002G290800 5.0kb downstream 5.0kb downstream 6780 true Chr02: 45937857-45944636 Phaseolus vulgaris
Phvul.002G290800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45937857-45942856 Phaseolus vulgaris
Phvul.002G290800 10.0kb upstream 10.0kb upstream 11780 true Chr02: 45942857-45954636 Phaseolus vulgaris
Phvul.002G290800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45944637-45954636 Phaseolus vulgaris
Phvul.002G290800 10.0kb downstream 10.0kb downstream 11780 true Chr02: 45932857-45944636 Phaseolus vulgaris
Phvul.002G290800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45932857-45942856 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299845 5265 Fabidae View MSA
124060798 5270 Rosid View MSA
123737631 5271 Pentapetalae View MSA
122791240 5272 Eudicot View MSA
122042173 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3316 0.0 27.4354    
cufflinks 6.62096 0.0 18.2807    
cufflinks 1.89263 0.0 6.01128   Low
cufflinks 9.03706 0.0 24.2018    
cufflinks 7.58214 0.0 20.6342    
cufflinks 8.61946 0.0 23.2771    
cufflinks 63.4894 0.0 173.483 High High
cufflinks 29.6106 0.0 76.7868 High  
cufflinks 28.96 0.0 75.135    
cufflinks 22.6283 0.0 58.4899    
cufflinks 8.80741 0.0 23.6445    

0 Strain