Gene : Phvul.002G282200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF8 - AUXIN RESPONSE FACTOR 2 Genomic Order:  2803
Name:  ? Phvul.002G282200 Secondary Identifier:  ? PAC:37177160
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G282200 0.5kb upstream 0.5kb upstream 5544 true Chr02: 45144916-45150459 Phaseolus vulgaris
Phvul.002G282200 0.5kb upstream 0.5kb upstream 500 false Chr02: 45144916-45145415 Phaseolus vulgaris
Phvul.002G282200 0.5kb downstream 0.5kb downstream 5544 true Chr02: 45145416-45150959 Phaseolus vulgaris
Phvul.002G282200 0.5kb downstream 0.5kb downstream 500 false Chr02: 45150460-45150959 Phaseolus vulgaris
Phvul.002G282200 1.0kb upstream 1.0kb upstream 6044 true Chr02: 45144416-45150459 Phaseolus vulgaris
Phvul.002G282200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45144416-45145415 Phaseolus vulgaris
Phvul.002G282200 1.0kb downstream 1.0kb downstream 6044 true Chr02: 45145416-45151459 Phaseolus vulgaris
Phvul.002G282200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45150460-45151459 Phaseolus vulgaris
Phvul.002G282200 2.0kb upstream 2.0kb upstream 7044 true Chr02: 45143416-45150459 Phaseolus vulgaris
Phvul.002G282200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45143416-45145415 Phaseolus vulgaris
Phvul.002G282200 2.0kb downstream 2.0kb downstream 7044 true Chr02: 45145416-45152459 Phaseolus vulgaris
Phvul.002G282200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45150460-45152459 Phaseolus vulgaris
Phvul.002G282200 5.0kb upstream 5.0kb upstream 10044 true Chr02: 45140416-45150459 Phaseolus vulgaris
Phvul.002G282200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45140416-45145415 Phaseolus vulgaris
Phvul.002G282200 5.0kb downstream 5.0kb downstream 10044 true Chr02: 45145416-45155459 Phaseolus vulgaris
Phvul.002G282200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45150460-45155459 Phaseolus vulgaris
Phvul.002G282200 10.0kb upstream 10.0kb upstream 15044 true Chr02: 45135416-45150459 Phaseolus vulgaris
Phvul.002G282200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45135416-45145415 Phaseolus vulgaris
Phvul.002G282200 10.0kb downstream 10.0kb downstream 15044 true Chr02: 45145416-45160459 Phaseolus vulgaris
Phvul.002G282200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45150460-45160459 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300136 5265 Fabidae View MSA
124074204 5270 Rosid View MSA
123738265 5271 Pentapetalae View MSA
122792462 5272 Eudicot View MSA
122051461 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4533 0.0 56.5798    
cufflinks 60.2249 0.0 176.023 High  
cufflinks 91.4277 0.0 284.472 High High
cufflinks 10.3622 0.0 26.8031   Low
cufflinks 44.1133 0.0 123.546 High  
cufflinks 92.3823 0.0 288.293 High High
cufflinks 39.523 0.0 110.226 High  
cufflinks 25.2888 0.0 67.7338    
cufflinks 31.1652 0.0 84.6623 High  
cufflinks 97.2486 0.0 306.263 High High
cufflinks 57.2205 0.0 165.938 High  

0 Strain