Gene : Phvul.002G278100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11108:SF5 - FERROCHELATASE-2, CHLOROPLASTIC Genomic Order:  2759
Name:  ? Phvul.002G278100 Secondary Identifier:  ? PAC:37178422
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris HEME-BIOSYNTHESIS-II Phaseolus vulgaris pathologic  
Pvulgaris PWY-5918 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G278100 0.5kb upstream 0.5kb upstream 6530 true Chr02: 44768442-44774971 Phaseolus vulgaris
Phvul.002G278100 0.5kb upstream 0.5kb upstream 500 false Chr02: 44774472-44774971 Phaseolus vulgaris
Phvul.002G278100 0.5kb downstream 0.5kb downstream 6530 true Chr02: 44767942-44774471 Phaseolus vulgaris
Phvul.002G278100 0.5kb downstream 0.5kb downstream 500 false Chr02: 44767942-44768441 Phaseolus vulgaris
Phvul.002G278100 1.0kb upstream 1.0kb upstream 7030 true Chr02: 44768442-44775471 Phaseolus vulgaris
Phvul.002G278100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44774472-44775471 Phaseolus vulgaris
Phvul.002G278100 1.0kb downstream 1.0kb downstream 7030 true Chr02: 44767442-44774471 Phaseolus vulgaris
Phvul.002G278100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44767442-44768441 Phaseolus vulgaris
Phvul.002G278100 2.0kb upstream 2.0kb upstream 8030 true Chr02: 44768442-44776471 Phaseolus vulgaris
Phvul.002G278100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44774472-44776471 Phaseolus vulgaris
Phvul.002G278100 2.0kb downstream 2.0kb downstream 8030 true Chr02: 44766442-44774471 Phaseolus vulgaris
Phvul.002G278100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44766442-44768441 Phaseolus vulgaris
Phvul.002G278100 5.0kb upstream 5.0kb upstream 11030 true Chr02: 44768442-44779471 Phaseolus vulgaris
Phvul.002G278100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44774472-44779471 Phaseolus vulgaris
Phvul.002G278100 5.0kb downstream 5.0kb downstream 11030 true Chr02: 44763442-44774471 Phaseolus vulgaris
Phvul.002G278100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44763442-44768441 Phaseolus vulgaris
Phvul.002G278100 10.0kb upstream 10.0kb upstream 16030 true Chr02: 44768442-44784471 Phaseolus vulgaris
Phvul.002G278100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44774472-44784471 Phaseolus vulgaris
Phvul.002G278100 10.0kb downstream 10.0kb downstream 16030 true Chr02: 44758442-44774471 Phaseolus vulgaris
Phvul.002G278100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44758442-44768441 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308904 5265 Fabidae View MSA
124065321 5270 Rosid View MSA
123739470 5271 Pentapetalae View MSA
122791512 5272 Eudicot View MSA
122044162 5273 Angiosperm View MSA
121346360 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.27703 0.0 12.3172    
cufflinks 3.13422 0.0 9.35603    
cufflinks 27.0846 0.0 70.111   High
cufflinks 1.80957 0.0 5.8022    
cufflinks 2.02804 0.0 6.41208    
cufflinks 7.56834 0.0 20.6743    
cufflinks 0.450737 0.0 1.65857 Low  
cufflinks 0.291634 0.0 1.108 Low Low
cufflinks 0.189919 0.0 0.751591 Low Low
cufflinks 35.1822 0.0 91.5774   High
cufflinks 1.58878 0.0 5.15364    

0 Strain