Gene : Phvul.002G270300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2678
Name:  ? Phvul.002G270300 Secondary Identifier:  ? PAC:37177874
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G270300 0.5kb upstream 0.5kb upstream 2381 true Chr02: 44079956-44082336 Phaseolus vulgaris
Phvul.002G270300 0.5kb upstream 0.5kb upstream 500 false Chr02: 44079956-44080455 Phaseolus vulgaris
Phvul.002G270300 0.5kb downstream 0.5kb downstream 2381 true Chr02: 44080456-44082836 Phaseolus vulgaris
Phvul.002G270300 0.5kb downstream 0.5kb downstream 500 false Chr02: 44082337-44082836 Phaseolus vulgaris
Phvul.002G270300 1.0kb upstream 1.0kb upstream 2881 true Chr02: 44079456-44082336 Phaseolus vulgaris
Phvul.002G270300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44079456-44080455 Phaseolus vulgaris
Phvul.002G270300 1.0kb downstream 1.0kb downstream 2881 true Chr02: 44080456-44083336 Phaseolus vulgaris
Phvul.002G270300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44082337-44083336 Phaseolus vulgaris
Phvul.002G270300 2.0kb upstream 2.0kb upstream 3881 true Chr02: 44078456-44082336 Phaseolus vulgaris
Phvul.002G270300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44078456-44080455 Phaseolus vulgaris
Phvul.002G270300 2.0kb downstream 2.0kb downstream 3881 true Chr02: 44080456-44084336 Phaseolus vulgaris
Phvul.002G270300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44082337-44084336 Phaseolus vulgaris
Phvul.002G270300 5.0kb upstream 5.0kb upstream 6881 true Chr02: 44075456-44082336 Phaseolus vulgaris
Phvul.002G270300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44075456-44080455 Phaseolus vulgaris
Phvul.002G270300 5.0kb downstream 5.0kb downstream 6881 true Chr02: 44080456-44087336 Phaseolus vulgaris
Phvul.002G270300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44082337-44087336 Phaseolus vulgaris
Phvul.002G270300 10.0kb upstream 10.0kb upstream 11881 true Chr02: 44070456-44082336 Phaseolus vulgaris
Phvul.002G270300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44070456-44080455 Phaseolus vulgaris
Phvul.002G270300 10.0kb downstream 10.0kb downstream 11881 true Chr02: 44080456-44092336 Phaseolus vulgaris
Phvul.002G270300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44082337-44092336 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312368 5265 Fabidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2177 0.0 47.2198    
cufflinks 17.8847 0.0 46.4016    
cufflinks 2.39897 0.0 7.44734   Low
cufflinks 6.91022 0.0 18.9941    
cufflinks 18.5224 0.0 47.9957    
cufflinks 9.3315 0.0 25.1203    
cufflinks 18.0601 0.0 46.7761    
cufflinks 8.66526 0.0 23.468    
cufflinks 11.6931 0.0 30.8395    
cufflinks 28.2529 0.0 73.1257   High
cufflinks 21.1125 0.0 54.5874    

0 Strain