Gene : Phvul.002G271000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12565:SF74 - TRANSCRIPTION FACTOR HEC1 Genomic Order:  2685
Name:  ? Phvul.002G271000 Secondary Identifier:  ? PAC:37176409
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G271000 0.5kb upstream 0.5kb upstream 1840 true Chr02: 44186487-44188326 Phaseolus vulgaris
Phvul.002G271000 0.5kb upstream 0.5kb upstream 500 false Chr02: 44186487-44186986 Phaseolus vulgaris
Phvul.002G271000 0.5kb downstream 0.5kb downstream 1840 true Chr02: 44186987-44188826 Phaseolus vulgaris
Phvul.002G271000 0.5kb downstream 0.5kb downstream 500 false Chr02: 44188327-44188826 Phaseolus vulgaris
Phvul.002G271000 1.0kb upstream 1.0kb upstream 2340 true Chr02: 44185987-44188326 Phaseolus vulgaris
Phvul.002G271000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44185987-44186986 Phaseolus vulgaris
Phvul.002G271000 1.0kb downstream 1.0kb downstream 2340 true Chr02: 44186987-44189326 Phaseolus vulgaris
Phvul.002G271000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44188327-44189326 Phaseolus vulgaris
Phvul.002G271000 2.0kb upstream 2.0kb upstream 3340 true Chr02: 44184987-44188326 Phaseolus vulgaris
Phvul.002G271000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44184987-44186986 Phaseolus vulgaris
Phvul.002G271000 2.0kb downstream 2.0kb downstream 3340 true Chr02: 44186987-44190326 Phaseolus vulgaris
Phvul.002G271000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44188327-44190326 Phaseolus vulgaris
Phvul.002G271000 5.0kb upstream 5.0kb upstream 6340 true Chr02: 44181987-44188326 Phaseolus vulgaris
Phvul.002G271000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44181987-44186986 Phaseolus vulgaris
Phvul.002G271000 5.0kb downstream 5.0kb downstream 6340 true Chr02: 44186987-44193326 Phaseolus vulgaris
Phvul.002G271000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44188327-44193326 Phaseolus vulgaris
Phvul.002G271000 10.0kb upstream 10.0kb upstream 11340 true Chr02: 44176987-44188326 Phaseolus vulgaris
Phvul.002G271000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44176987-44186986 Phaseolus vulgaris
Phvul.002G271000 10.0kb downstream 10.0kb downstream 11340 true Chr02: 44186987-44198326 Phaseolus vulgaris
Phvul.002G271000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44188327-44198326 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312340 5265 Fabidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.505575 0.0 1.92246    
cufflinks 1.63699 0.0 5.56925   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.784774 0.0 2.86464    
cufflinks 0.0457545 0.0 0.214843 Low  
cufflinks 0.0351839 0.0 0.16964 Low  
cufflinks 0.0578836 0.0 0.263543 Low  
cufflinks 0.0887799 0.0 0.388739 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.37059 0.0 4.76581   High
cufflinks 0.0274012 0.0 0.135939 Low Low

0 Strain