Gene : Phvul.002G273300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR19241:SF230 - ABC TRANSPORTER G FAMILY MEMBER 5 Genomic Order:  2709
Name:  ? Phvul.002G273300 Secondary Identifier:  ? PAC:37174618
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G273300 0.5kb upstream 0.5kb upstream 2441 true Chr02: 44366862-44369302 Phaseolus vulgaris
Phvul.002G273300 0.5kb upstream 0.5kb upstream 500 false Chr02: 44366862-44367361 Phaseolus vulgaris
Phvul.002G273300 0.5kb downstream 0.5kb downstream 2441 true Chr02: 44367362-44369802 Phaseolus vulgaris
Phvul.002G273300 0.5kb downstream 0.5kb downstream 500 false Chr02: 44369303-44369802 Phaseolus vulgaris
Phvul.002G273300 1.0kb upstream 1.0kb upstream 2941 true Chr02: 44366362-44369302 Phaseolus vulgaris
Phvul.002G273300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44366362-44367361 Phaseolus vulgaris
Phvul.002G273300 1.0kb downstream 1.0kb downstream 2941 true Chr02: 44367362-44370302 Phaseolus vulgaris
Phvul.002G273300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44369303-44370302 Phaseolus vulgaris
Phvul.002G273300 2.0kb upstream 2.0kb upstream 3941 true Chr02: 44365362-44369302 Phaseolus vulgaris
Phvul.002G273300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44365362-44367361 Phaseolus vulgaris
Phvul.002G273300 2.0kb downstream 2.0kb downstream 3941 true Chr02: 44367362-44371302 Phaseolus vulgaris
Phvul.002G273300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44369303-44371302 Phaseolus vulgaris
Phvul.002G273300 5.0kb upstream 5.0kb upstream 6941 true Chr02: 44362362-44369302 Phaseolus vulgaris
Phvul.002G273300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44362362-44367361 Phaseolus vulgaris
Phvul.002G273300 5.0kb downstream 5.0kb downstream 6941 true Chr02: 44367362-44374302 Phaseolus vulgaris
Phvul.002G273300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44369303-44374302 Phaseolus vulgaris
Phvul.002G273300 10.0kb upstream 10.0kb upstream 11941 true Chr02: 44357362-44369302 Phaseolus vulgaris
Phvul.002G273300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44357362-44367361 Phaseolus vulgaris
Phvul.002G273300 10.0kb downstream 10.0kb downstream 11941 true Chr02: 44367362-44379302 Phaseolus vulgaris
Phvul.002G273300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44369303-44379302 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307117 5265 Fabidae View MSA
124062291 5270 Rosid View MSA
123751722 5271 Pentapetalae View MSA
122792802 5272 Eudicot View MSA
122047633 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02013 0.0 14.3607    
cufflinks 7.72465 0.0 21.2004    
cufflinks 30.2548 0.0 78.3713   High
cufflinks 9.5872 0.0 26.0139    
cufflinks 11.5504 0.0 30.7924    
cufflinks 25.9634 0.0 67.1134   High
cufflinks 6.60387 0.0 18.4162    
cufflinks 15.9184 0.0 41.4985    
cufflinks 2.74145 0.0 8.41562   Low
cufflinks 6.1845 0.0 17.3135    
cufflinks 12.9519 0.0 34.2355    

0 Strain