Gene : Phvul.002G261400 P. vulgaris v2.1
Defline:  (1 of 22) K07904 - Ras-related protein Rab-11A (RAB11A) Genomic Order:  2590
Name:  ? Phvul.002G261400 Secondary Identifier:  ? PAC:37178358
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G261400 0.5kb upstream 0.5kb upstream 3503 true Chr02: 43319870-43323372 Phaseolus vulgaris
Phvul.002G261400 0.5kb upstream 0.5kb upstream 500 false Chr02: 43322873-43323372 Phaseolus vulgaris
Phvul.002G261400 0.5kb downstream 0.5kb downstream 3503 true Chr02: 43319370-43322872 Phaseolus vulgaris
Phvul.002G261400 0.5kb downstream 0.5kb downstream 500 false Chr02: 43319370-43319869 Phaseolus vulgaris
Phvul.002G261400 1.0kb upstream 1.0kb upstream 4003 true Chr02: 43319870-43323872 Phaseolus vulgaris
Phvul.002G261400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43322873-43323872 Phaseolus vulgaris
Phvul.002G261400 1.0kb downstream 1.0kb downstream 4003 true Chr02: 43318870-43322872 Phaseolus vulgaris
Phvul.002G261400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43318870-43319869 Phaseolus vulgaris
Phvul.002G261400 2.0kb upstream 2.0kb upstream 5003 true Chr02: 43319870-43324872 Phaseolus vulgaris
Phvul.002G261400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43322873-43324872 Phaseolus vulgaris
Phvul.002G261400 2.0kb downstream 2.0kb downstream 5003 true Chr02: 43317870-43322872 Phaseolus vulgaris
Phvul.002G261400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43317870-43319869 Phaseolus vulgaris
Phvul.002G261400 5.0kb upstream 5.0kb upstream 8003 true Chr02: 43319870-43327872 Phaseolus vulgaris
Phvul.002G261400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43322873-43327872 Phaseolus vulgaris
Phvul.002G261400 5.0kb downstream 5.0kb downstream 8003 true Chr02: 43314870-43322872 Phaseolus vulgaris
Phvul.002G261400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43314870-43319869 Phaseolus vulgaris
Phvul.002G261400 10.0kb upstream 10.0kb upstream 13003 true Chr02: 43319870-43332872 Phaseolus vulgaris
Phvul.002G261400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43322873-43332872 Phaseolus vulgaris
Phvul.002G261400 10.0kb downstream 10.0kb downstream 13003 true Chr02: 43309870-43322872 Phaseolus vulgaris
Phvul.002G261400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43309870-43319869 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312719 5265 Fabidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.6451 0.0 105.292 High  
cufflinks 30.9483 0.0 79.9983    
cufflinks 16.9387 0.0 44.6482   Low
cufflinks 59.0381 0.0 155.07 High High
cufflinks 36.1852 0.0 93.5502 High  
cufflinks 19.3138 0.0 50.4829   Low
cufflinks 27.9642 0.0 72.3052 High  
cufflinks 25.3477 0.0 65.6243    
cufflinks 31.8864 0.0 82.4315 High  
cufflinks 36.2811 0.0 93.8218 High  
cufflinks 50.8047 0.0 132.534 High High

0 Strain