Gene : Phvul.002G265300 P. vulgaris v2.1
Defline:  (1 of 1) K07933 - Rab-like protein 3 (RABL3) Genomic Order:  2629
Name:  ? Phvul.002G265300 Secondary Identifier:  ? PAC:37178850
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G265300 0.5kb upstream 0.5kb upstream 5119 true Chr02: 43636426-43641544 Phaseolus vulgaris
Phvul.002G265300 0.5kb upstream 0.5kb upstream 500 false Chr02: 43641045-43641544 Phaseolus vulgaris
Phvul.002G265300 0.5kb downstream 0.5kb downstream 5119 true Chr02: 43635926-43641044 Phaseolus vulgaris
Phvul.002G265300 0.5kb downstream 0.5kb downstream 500 false Chr02: 43635926-43636425 Phaseolus vulgaris
Phvul.002G265300 1.0kb upstream 1.0kb upstream 5619 true Chr02: 43636426-43642044 Phaseolus vulgaris
Phvul.002G265300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43641045-43642044 Phaseolus vulgaris
Phvul.002G265300 1.0kb downstream 1.0kb downstream 5619 true Chr02: 43635426-43641044 Phaseolus vulgaris
Phvul.002G265300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43635426-43636425 Phaseolus vulgaris
Phvul.002G265300 2.0kb upstream 2.0kb upstream 6619 true Chr02: 43636426-43643044 Phaseolus vulgaris
Phvul.002G265300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43641045-43643044 Phaseolus vulgaris
Phvul.002G265300 2.0kb downstream 2.0kb downstream 6619 true Chr02: 43634426-43641044 Phaseolus vulgaris
Phvul.002G265300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43634426-43636425 Phaseolus vulgaris
Phvul.002G265300 5.0kb upstream 5.0kb upstream 9619 true Chr02: 43636426-43646044 Phaseolus vulgaris
Phvul.002G265300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43641045-43646044 Phaseolus vulgaris
Phvul.002G265300 5.0kb downstream 5.0kb downstream 9619 true Chr02: 43631426-43641044 Phaseolus vulgaris
Phvul.002G265300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43631426-43636425 Phaseolus vulgaris
Phvul.002G265300 10.0kb upstream 10.0kb upstream 14619 true Chr02: 43636426-43651044 Phaseolus vulgaris
Phvul.002G265300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43641045-43651044 Phaseolus vulgaris
Phvul.002G265300 10.0kb downstream 10.0kb downstream 14619 true Chr02: 43626426-43641044 Phaseolus vulgaris
Phvul.002G265300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43626426-43636425 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301015 5265 Fabidae View MSA
124064941 5270 Rosid View MSA
123738246 5271 Pentapetalae View MSA
122786291 5272 Eudicot View MSA
122044978 5273 Angiosperm View MSA
121310378 5274 Embryophyte View MSA
123427949 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3233 0.0 37.613    
cufflinks 11.0031 0.0 29.4305   Low
cufflinks 22.8238 0.0 59.0427   High
cufflinks 17.6754 0.0 46.026    
cufflinks 18.0183 0.0 46.9251    
cufflinks 12.3273 0.0 32.7088    
cufflinks 14.6613 0.0 38.415    
cufflinks 10.7264 0.0 28.6839   Low
cufflinks 14.8069 0.0 38.8229    
cufflinks 17.915 0.0 46.6326    
cufflinks 18.4884 0.0 48.0447    

0 Strain