Gene : Phvul.002G248000 P. vulgaris v2.1
Defline:  (1 of 1) K01653 - acetolactate synthase I/III small subunit (E2.2.1.6S, ilvH, ilvN) Genomic Order:  2452
Name:  ? Phvul.002G248000 Secondary Identifier:  ? PAC:37178154
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris BRANCHED-CHAIN-AA-SYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris ILEUSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3001 Phaseolus vulgaris pathologic  
Pvulgaris VALSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G248000 0.5kb upstream 0.5kb upstream 11795 true Chr02: 42034422-42046216 Phaseolus vulgaris
Phvul.002G248000 0.5kb upstream 0.5kb upstream 500 false Chr02: 42034422-42034921 Phaseolus vulgaris
Phvul.002G248000 0.5kb downstream 0.5kb downstream 11795 true Chr02: 42034922-42046716 Phaseolus vulgaris
Phvul.002G248000 0.5kb downstream 0.5kb downstream 500 false Chr02: 42046217-42046716 Phaseolus vulgaris
Phvul.002G248000 1.0kb upstream 1.0kb upstream 12295 true Chr02: 42033922-42046216 Phaseolus vulgaris
Phvul.002G248000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42033922-42034921 Phaseolus vulgaris
Phvul.002G248000 1.0kb downstream 1.0kb downstream 12295 true Chr02: 42034922-42047216 Phaseolus vulgaris
Phvul.002G248000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42046217-42047216 Phaseolus vulgaris
Phvul.002G248000 2.0kb upstream 2.0kb upstream 13295 true Chr02: 42032922-42046216 Phaseolus vulgaris
Phvul.002G248000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42032922-42034921 Phaseolus vulgaris
Phvul.002G248000 2.0kb downstream 2.0kb downstream 13295 true Chr02: 42034922-42048216 Phaseolus vulgaris
Phvul.002G248000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42046217-42048216 Phaseolus vulgaris
Phvul.002G248000 5.0kb upstream 5.0kb upstream 16295 true Chr02: 42029922-42046216 Phaseolus vulgaris
Phvul.002G248000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42029922-42034921 Phaseolus vulgaris
Phvul.002G248000 5.0kb downstream 5.0kb downstream 16295 true Chr02: 42034922-42051216 Phaseolus vulgaris
Phvul.002G248000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42046217-42051216 Phaseolus vulgaris
Phvul.002G248000 10.0kb upstream 10.0kb upstream 21295 true Chr02: 42024922-42046216 Phaseolus vulgaris
Phvul.002G248000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42024922-42034921 Phaseolus vulgaris
Phvul.002G248000 10.0kb downstream 10.0kb downstream 21295 true Chr02: 42034922-42056216 Phaseolus vulgaris
Phvul.002G248000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42046217-42056216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122300213 5265 Fabidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4719 0.0 71.0801    
cufflinks 48.4633 0.0 128.026 High High
cufflinks 58.4729 0.0 156.438 High High
cufflinks 42.157 0.0 110.45 High  
cufflinks 39.9737 0.0 104.371 High  
cufflinks 37.4568 0.0 97.5883 High  
cufflinks 20.9583 0.0 54.2165   Low
cufflinks 25.6809 0.0 66.387    
cufflinks 25.666 0.0 66.3493    
cufflinks 33.935 0.0 88.1423    
cufflinks 37.5461 0.0 97.8872 High  

0 Strain