Gene : Phvul.002G250000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23086:SF25 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 7-RELATED Genomic Order:  2475
Name:  ? Phvul.002G250000 Secondary Identifier:  ? PAC:37174602
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6351 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6352 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G250000 0.5kb upstream 0.5kb upstream 8144 true Chr02: 42247171-42255314 Phaseolus vulgaris
Phvul.002G250000 0.5kb upstream 0.5kb upstream 500 false Chr02: 42247171-42247670 Phaseolus vulgaris
Phvul.002G250000 0.5kb downstream 0.5kb downstream 8144 true Chr02: 42247671-42255814 Phaseolus vulgaris
Phvul.002G250000 0.5kb downstream 0.5kb downstream 500 false Chr02: 42255315-42255814 Phaseolus vulgaris
Phvul.002G250000 1.0kb upstream 1.0kb upstream 8644 true Chr02: 42246671-42255314 Phaseolus vulgaris
Phvul.002G250000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42246671-42247670 Phaseolus vulgaris
Phvul.002G250000 1.0kb downstream 1.0kb downstream 8644 true Chr02: 42247671-42256314 Phaseolus vulgaris
Phvul.002G250000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42255315-42256314 Phaseolus vulgaris
Phvul.002G250000 2.0kb upstream 2.0kb upstream 9644 true Chr02: 42245671-42255314 Phaseolus vulgaris
Phvul.002G250000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42245671-42247670 Phaseolus vulgaris
Phvul.002G250000 2.0kb downstream 2.0kb downstream 9644 true Chr02: 42247671-42257314 Phaseolus vulgaris
Phvul.002G250000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42255315-42257314 Phaseolus vulgaris
Phvul.002G250000 5.0kb upstream 5.0kb upstream 12644 true Chr02: 42242671-42255314 Phaseolus vulgaris
Phvul.002G250000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42242671-42247670 Phaseolus vulgaris
Phvul.002G250000 5.0kb downstream 5.0kb downstream 12644 true Chr02: 42247671-42260314 Phaseolus vulgaris
Phvul.002G250000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42255315-42260314 Phaseolus vulgaris
Phvul.002G250000 10.0kb upstream 10.0kb upstream 17644 true Chr02: 42237671-42255314 Phaseolus vulgaris
Phvul.002G250000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42237671-42247670 Phaseolus vulgaris
Phvul.002G250000 10.0kb downstream 10.0kb downstream 17644 true Chr02: 42247671-42265314 Phaseolus vulgaris
Phvul.002G250000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42255315-42265314 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308738 5265 Fabidae View MSA
124065349 5270 Rosid View MSA
123742809 5271 Pentapetalae View MSA
122786651 5272 Eudicot View MSA
122046266 5273 Angiosperm View MSA
121310580 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.07756 0.0 21.2041    
cufflinks 5.88952 0.0 15.8025   Low
cufflinks 12.8693 0.0 33.2755    
cufflinks 9.21084 0.0 24.1742    
cufflinks 9.44699 0.0 24.7354    
cufflinks 8.5597 0.0 22.3951    
cufflinks 32.6978 0.0 87.2171 High High
cufflinks 26.9831 0.0 71.3594   High
cufflinks 22.0074 0.0 57.26   High
cufflinks 16.1876 0.0 41.8562    
cufflinks 8.62732 0.0 22.6571    

0 Strain