Gene : Phvul.002G254900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31718:SF0 - EXPRESSED PROTEIN-RELATED Genomic Order:  2525
Name:  ? Phvul.002G254900 Secondary Identifier:  ? PAC:37176364
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G254900 0.5kb upstream 0.5kb upstream 1518 true Chr02: 42726242-42727759 Phaseolus vulgaris
Phvul.002G254900 0.5kb upstream 0.5kb upstream 500 false Chr02: 42727260-42727759 Phaseolus vulgaris
Phvul.002G254900 0.5kb downstream 0.5kb downstream 1518 true Chr02: 42725742-42727259 Phaseolus vulgaris
Phvul.002G254900 0.5kb downstream 0.5kb downstream 500 false Chr02: 42725742-42726241 Phaseolus vulgaris
Phvul.002G254900 1.0kb upstream 1.0kb upstream 2018 true Chr02: 42726242-42728259 Phaseolus vulgaris
Phvul.002G254900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42727260-42728259 Phaseolus vulgaris
Phvul.002G254900 1.0kb downstream 1.0kb downstream 2018 true Chr02: 42725242-42727259 Phaseolus vulgaris
Phvul.002G254900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42725242-42726241 Phaseolus vulgaris
Phvul.002G254900 2.0kb upstream 2.0kb upstream 3018 true Chr02: 42726242-42729259 Phaseolus vulgaris
Phvul.002G254900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42727260-42729259 Phaseolus vulgaris
Phvul.002G254900 2.0kb downstream 2.0kb downstream 3018 true Chr02: 42724242-42727259 Phaseolus vulgaris
Phvul.002G254900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42724242-42726241 Phaseolus vulgaris
Phvul.002G254900 5.0kb upstream 5.0kb upstream 6018 true Chr02: 42726242-42732259 Phaseolus vulgaris
Phvul.002G254900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42727260-42732259 Phaseolus vulgaris
Phvul.002G254900 5.0kb downstream 5.0kb downstream 6018 true Chr02: 42721242-42727259 Phaseolus vulgaris
Phvul.002G254900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42721242-42726241 Phaseolus vulgaris
Phvul.002G254900 10.0kb upstream 10.0kb upstream 11018 true Chr02: 42726242-42737259 Phaseolus vulgaris
Phvul.002G254900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42727260-42737259 Phaseolus vulgaris
Phvul.002G254900 10.0kb downstream 10.0kb downstream 11018 true Chr02: 42716242-42727259 Phaseolus vulgaris
Phvul.002G254900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42716242-42726241 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314171 5265 Fabidae View MSA
124065222 5270 Rosid View MSA
123742861 5271 Pentapetalae View MSA
122790879 5272 Eudicot View MSA
122048242 5273 Angiosperm View MSA
121351079 5274 Embryophyte View MSA
123381999 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.1622 0.0 187.648 High  
cufflinks 408.771 0.0 1272.09 High High
cufflinks 41.9009 0.0 108.572 High  
cufflinks 661.897 0.0 2293.71 High High
cufflinks 149.253 0.0 409.156 High  
cufflinks 59.7382 0.0 154.62 High  
cufflinks 25.365 0.0 66.7191    
cufflinks 6.54212 0.0 19.6051   Low
cufflinks 72.1017 0.0 187.899 High  
cufflinks 5.39527 0.0 16.4897   Low
cufflinks 160.551 0.0 444.018 High  

0 Strain