Gene : Phvul.003G037600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Genomic Order:  383
Name:  ? Phvul.003G037600 Secondary Identifier:  ? PAC:37147459
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G037600 0.5kb upstream 0.5kb upstream 6186 true Chr03: 3944497-3950682 Phaseolus vulgaris
Phvul.003G037600 0.5kb upstream 0.5kb upstream 500 false Chr03: 3944497-3944996 Phaseolus vulgaris
Phvul.003G037600 0.5kb downstream 0.5kb downstream 6186 true Chr03: 3944997-3951182 Phaseolus vulgaris
Phvul.003G037600 0.5kb downstream 0.5kb downstream 500 false Chr03: 3950683-3951182 Phaseolus vulgaris
Phvul.003G037600 1.0kb upstream 1.0kb upstream 6686 true Chr03: 3943997-3950682 Phaseolus vulgaris
Phvul.003G037600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3943997-3944996 Phaseolus vulgaris
Phvul.003G037600 1.0kb downstream 1.0kb downstream 6686 true Chr03: 3944997-3951682 Phaseolus vulgaris
Phvul.003G037600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3950683-3951682 Phaseolus vulgaris
Phvul.003G037600 2.0kb upstream 2.0kb upstream 7686 true Chr03: 3942997-3950682 Phaseolus vulgaris
Phvul.003G037600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3942997-3944996 Phaseolus vulgaris
Phvul.003G037600 2.0kb downstream 2.0kb downstream 7686 true Chr03: 3944997-3952682 Phaseolus vulgaris
Phvul.003G037600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3950683-3952682 Phaseolus vulgaris
Phvul.003G037600 5.0kb upstream 5.0kb upstream 10686 true Chr03: 3939997-3950682 Phaseolus vulgaris
Phvul.003G037600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3939997-3944996 Phaseolus vulgaris
Phvul.003G037600 5.0kb downstream 5.0kb downstream 10686 true Chr03: 3944997-3955682 Phaseolus vulgaris
Phvul.003G037600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3950683-3955682 Phaseolus vulgaris
Phvul.003G037600 10.0kb upstream 10.0kb upstream 15686 true Chr03: 3934997-3950682 Phaseolus vulgaris
Phvul.003G037600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3934997-3944996 Phaseolus vulgaris
Phvul.003G037600 10.0kb downstream 10.0kb downstream 15686 true Chr03: 3944997-3960682 Phaseolus vulgaris
Phvul.003G037600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3950683-3960682 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301733 5265 Fabidae View MSA
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.366 0.0 55.3361   High
cufflinks 16.816 0.0 43.8763    
cufflinks 12.1899 0.0 32.349   Low
cufflinks 18.8531 0.0 49.0272    
cufflinks 15.1781 0.0 39.946    
cufflinks 13.6173 0.0 35.9063   Low
cufflinks 16.836 0.0 43.8631    
cufflinks 15.2438 0.0 39.874    
cufflinks 16.663 0.0 43.4138    
cufflinks 25.2381 0.0 65.2536   High
cufflinks 20.8895 0.0 54.1863    

0 Strain