Gene : Phvul.003G042000 P. vulgaris v2.1
Defline:  (1 of 2) PF07897 - Ethylene-responsive binding factor-associated repression (EAR) Genomic Order:  428
Name:  ? Phvul.003G042000 Secondary Identifier:  ? PAC:37147932
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G042000 0.5kb upstream 0.5kb upstream 4915 true Chr03: 4826756-4831670 Phaseolus vulgaris
Phvul.003G042000 0.5kb upstream 0.5kb upstream 500 false Chr03: 4831171-4831670 Phaseolus vulgaris
Phvul.003G042000 0.5kb downstream 0.5kb downstream 4915 true Chr03: 4826256-4831170 Phaseolus vulgaris
Phvul.003G042000 0.5kb downstream 0.5kb downstream 500 false Chr03: 4826256-4826755 Phaseolus vulgaris
Phvul.003G042000 1.0kb upstream 1.0kb upstream 5415 true Chr03: 4826756-4832170 Phaseolus vulgaris
Phvul.003G042000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4831171-4832170 Phaseolus vulgaris
Phvul.003G042000 1.0kb downstream 1.0kb downstream 5415 true Chr03: 4825756-4831170 Phaseolus vulgaris
Phvul.003G042000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4825756-4826755 Phaseolus vulgaris
Phvul.003G042000 2.0kb upstream 2.0kb upstream 6415 true Chr03: 4826756-4833170 Phaseolus vulgaris
Phvul.003G042000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4831171-4833170 Phaseolus vulgaris
Phvul.003G042000 2.0kb downstream 2.0kb downstream 6415 true Chr03: 4824756-4831170 Phaseolus vulgaris
Phvul.003G042000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4824756-4826755 Phaseolus vulgaris
Phvul.003G042000 5.0kb upstream 5.0kb upstream 9415 true Chr03: 4826756-4836170 Phaseolus vulgaris
Phvul.003G042000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4831171-4836170 Phaseolus vulgaris
Phvul.003G042000 5.0kb downstream 5.0kb downstream 9415 true Chr03: 4821756-4831170 Phaseolus vulgaris
Phvul.003G042000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4821756-4826755 Phaseolus vulgaris
Phvul.003G042000 10.0kb upstream 10.0kb upstream 14415 true Chr03: 4826756-4841170 Phaseolus vulgaris
Phvul.003G042000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4831171-4841170 Phaseolus vulgaris
Phvul.003G042000 10.0kb downstream 10.0kb downstream 14415 true Chr03: 4816756-4831170 Phaseolus vulgaris
Phvul.003G042000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4816756-4826755 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315194 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48442 0.0 4.7033    
cufflinks 2.6275 0.0 7.80767    
cufflinks 0.780992 0.0 2.67398   Low
cufflinks 0.893789 0.0 3.02128   Low
cufflinks 1.66365 0.0 5.21853    
cufflinks 2.80159 0.0 8.26076    
cufflinks 4.58149 0.0 12.7657   High
cufflinks 2.51515 0.0 7.48647    
cufflinks 6.65553 0.0 17.988   High
cufflinks 1.28876 0.0 4.1589    
cufflinks 4.23681 0.0 11.9467    

0 Strain