Gene : Phvul.003G025600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H Genomic Order:  264
Name:  ? Phvul.003G025600 Secondary Identifier:  ? PAC:37144523
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G025600 0.5kb upstream 0.5kb upstream 6384 true Chr03: 2471837-2478220 Phaseolus vulgaris
Phvul.003G025600 0.5kb upstream 0.5kb upstream 500 false Chr03: 2477721-2478220 Phaseolus vulgaris
Phvul.003G025600 0.5kb downstream 0.5kb downstream 6384 true Chr03: 2471337-2477720 Phaseolus vulgaris
Phvul.003G025600 0.5kb downstream 0.5kb downstream 500 false Chr03: 2471337-2471836 Phaseolus vulgaris
Phvul.003G025600 1.0kb upstream 1.0kb upstream 6884 true Chr03: 2471837-2478720 Phaseolus vulgaris
Phvul.003G025600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2477721-2478720 Phaseolus vulgaris
Phvul.003G025600 1.0kb downstream 1.0kb downstream 6884 true Chr03: 2470837-2477720 Phaseolus vulgaris
Phvul.003G025600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2470837-2471836 Phaseolus vulgaris
Phvul.003G025600 2.0kb upstream 2.0kb upstream 7884 true Chr03: 2471837-2479720 Phaseolus vulgaris
Phvul.003G025600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2477721-2479720 Phaseolus vulgaris
Phvul.003G025600 2.0kb downstream 2.0kb downstream 7884 true Chr03: 2469837-2477720 Phaseolus vulgaris
Phvul.003G025600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2469837-2471836 Phaseolus vulgaris
Phvul.003G025600 5.0kb upstream 5.0kb upstream 10884 true Chr03: 2471837-2482720 Phaseolus vulgaris
Phvul.003G025600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2477721-2482720 Phaseolus vulgaris
Phvul.003G025600 5.0kb downstream 5.0kb downstream 10884 true Chr03: 2466837-2477720 Phaseolus vulgaris
Phvul.003G025600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2466837-2471836 Phaseolus vulgaris
Phvul.003G025600 10.0kb upstream 10.0kb upstream 15884 true Chr03: 2471837-2487720 Phaseolus vulgaris
Phvul.003G025600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2477721-2487720 Phaseolus vulgaris
Phvul.003G025600 10.0kb downstream 10.0kb downstream 15884 true Chr03: 2461837-2477720 Phaseolus vulgaris
Phvul.003G025600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2461837-2471836 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309189 5265 Fabidae View MSA
124065537 5270 Rosid View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.8324 0.0 110.81 High  
cufflinks 48.0977 0.0 128.808 High  
cufflinks 56.7785 0.0 154.528 High High
cufflinks 39.8602 0.0 105.149 High  
cufflinks 44.5079 0.0 118.141 High  
cufflinks 38.6914 0.0 102.089 High Low
cufflinks 39.2771 0.0 103.891 High  
cufflinks 45.4204 0.0 121.58 High  
cufflinks 41.4658 0.0 109.907 High  
cufflinks 44.4649 0.0 118.219 High  
cufflinks 41.8355 0.0 110.629 High  

0 Strain