Gene : Phvul.003G029400 P. vulgaris v2.1
Genomic Order:  302 Name:  ? Phvul.003G029400
Secondary Identifier:  ? PAC:37146331
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G029400 0.5kb upstream 0.5kb upstream 5066 true Chr03: 2935246-2940311 Phaseolus vulgaris
Phvul.003G029400 0.5kb upstream 0.5kb upstream 500 false Chr03: 2935246-2935745 Phaseolus vulgaris
Phvul.003G029400 0.5kb downstream 0.5kb downstream 5066 true Chr03: 2935746-2940811 Phaseolus vulgaris
Phvul.003G029400 0.5kb downstream 0.5kb downstream 500 false Chr03: 2940312-2940811 Phaseolus vulgaris
Phvul.003G029400 1.0kb upstream 1.0kb upstream 5566 true Chr03: 2934746-2940311 Phaseolus vulgaris
Phvul.003G029400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2934746-2935745 Phaseolus vulgaris
Phvul.003G029400 1.0kb downstream 1.0kb downstream 5566 true Chr03: 2935746-2941311 Phaseolus vulgaris
Phvul.003G029400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2940312-2941311 Phaseolus vulgaris
Phvul.003G029400 2.0kb upstream 2.0kb upstream 6566 true Chr03: 2933746-2940311 Phaseolus vulgaris
Phvul.003G029400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2933746-2935745 Phaseolus vulgaris
Phvul.003G029400 2.0kb downstream 2.0kb downstream 6566 true Chr03: 2935746-2942311 Phaseolus vulgaris
Phvul.003G029400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2940312-2942311 Phaseolus vulgaris
Phvul.003G029400 5.0kb upstream 5.0kb upstream 9566 true Chr03: 2930746-2940311 Phaseolus vulgaris
Phvul.003G029400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2930746-2935745 Phaseolus vulgaris
Phvul.003G029400 5.0kb downstream 5.0kb downstream 9566 true Chr03: 2935746-2945311 Phaseolus vulgaris
Phvul.003G029400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2940312-2945311 Phaseolus vulgaris
Phvul.003G029400 10.0kb upstream 10.0kb upstream 14566 true Chr03: 2925746-2940311 Phaseolus vulgaris
Phvul.003G029400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2925746-2935745 Phaseolus vulgaris
Phvul.003G029400 10.0kb downstream 10.0kb downstream 14566 true Chr03: 2935746-2950311 Phaseolus vulgaris
Phvul.003G029400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2940312-2950311 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041270 5273 Angiosperm View MSA
122254615 5265 Fabidae View MSA
124065274 5270 Rosid View MSA
123749330 5271 Pentapetalae View MSA
122794611 5272 Eudicot View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.573644 0.0 2.08941    
cufflinks 0.164315 0.0 0.663239 Low Low
cufflinks 0.164406 0.0 0.661886 Low Low
cufflinks 0.967993 0.0 3.37079    
cufflinks 0.640731 0.0 2.32461    
cufflinks 0.301641 0.0 1.16113 Low  
cufflinks 5.94382 0.0 16.8411   High
cufflinks 1.24611 0.0 4.18282    
cufflinks 1.63202 0.0 5.35656    
cufflinks 1.34491 0.0 4.49695    
cufflinks 7.26456 0.0 20.2919   High

0 Strain