Gene : Phvul.003G018300 P. vulgaris v2.1
Defline:  (1 of 2) K02981 - small subunit ribosomal protein S2e (RP-S2e, RPS2) Genomic Order:  190
Name:  ? Phvul.003G018300 Secondary Identifier:  ? PAC:37145445
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G018300 0.5kb upstream 0.5kb upstream 2608 true Chr03: 1750715-1753322 Phaseolus vulgaris
Phvul.003G018300 0.5kb upstream 0.5kb upstream 500 false Chr03: 1752823-1753322 Phaseolus vulgaris
Phvul.003G018300 0.5kb downstream 0.5kb downstream 2608 true Chr03: 1750215-1752822 Phaseolus vulgaris
Phvul.003G018300 0.5kb downstream 0.5kb downstream 500 false Chr03: 1750215-1750714 Phaseolus vulgaris
Phvul.003G018300 1.0kb upstream 1.0kb upstream 3108 true Chr03: 1750715-1753822 Phaseolus vulgaris
Phvul.003G018300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1752823-1753822 Phaseolus vulgaris
Phvul.003G018300 1.0kb downstream 1.0kb downstream 3108 true Chr03: 1749715-1752822 Phaseolus vulgaris
Phvul.003G018300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1749715-1750714 Phaseolus vulgaris
Phvul.003G018300 2.0kb upstream 2.0kb upstream 4108 true Chr03: 1750715-1754822 Phaseolus vulgaris
Phvul.003G018300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1752823-1754822 Phaseolus vulgaris
Phvul.003G018300 2.0kb downstream 2.0kb downstream 4108 true Chr03: 1748715-1752822 Phaseolus vulgaris
Phvul.003G018300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1748715-1750714 Phaseolus vulgaris
Phvul.003G018300 5.0kb upstream 5.0kb upstream 7108 true Chr03: 1750715-1757822 Phaseolus vulgaris
Phvul.003G018300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1752823-1757822 Phaseolus vulgaris
Phvul.003G018300 5.0kb downstream 5.0kb downstream 7108 true Chr03: 1745715-1752822 Phaseolus vulgaris
Phvul.003G018300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1745715-1750714 Phaseolus vulgaris
Phvul.003G018300 10.0kb upstream 10.0kb upstream 12108 true Chr03: 1750715-1762822 Phaseolus vulgaris
Phvul.003G018300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1752823-1762822 Phaseolus vulgaris
Phvul.003G018300 10.0kb downstream 10.0kb downstream 12108 true Chr03: 1740715-1752822 Phaseolus vulgaris
Phvul.003G018300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1740715-1750714 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309680 5265 Fabidae View MSA
124064962 5270 Rosid View MSA
123747493 5271 Pentapetalae View MSA
122787433 5272 Eudicot View MSA
122047189 5273 Angiosperm View MSA
121344542 5274 Embryophyte View MSA
123424194 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 192.916 0.0 584.332 High  
cufflinks 379.489 0.0 1299.44 High High
cufflinks 161.976 0.0 473.083 High Low
cufflinks 351.901 0.0 1192.39 High High
cufflinks 334.356 0.0 1121.04 High High
cufflinks 185.723 0.0 557.574 High  
cufflinks 179.415 0.0 542.644 High  
cufflinks 208.952 0.0 638.893 High  
cufflinks 297.288 0.0 982.436 High  
cufflinks 149.661 0.0 436.897 High Low
cufflinks 289.137 0.0 948.047 High  

0 Strain