Gene : Phvul.003G019200 P. vulgaris v2.1
Defline:  (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Genomic Order:  201
Name:  ? Phvul.003G019200 Secondary Identifier:  ? PAC:37147966
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris NAGLIPASYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G019200 0.5kb upstream 0.5kb upstream 5398 true Chr03: 1853012-1858409 Phaseolus vulgaris
Phvul.003G019200 0.5kb upstream 0.5kb upstream 500 false Chr03: 1857910-1858409 Phaseolus vulgaris
Phvul.003G019200 0.5kb downstream 0.5kb downstream 5398 true Chr03: 1852512-1857909 Phaseolus vulgaris
Phvul.003G019200 0.5kb downstream 0.5kb downstream 500 false Chr03: 1852512-1853011 Phaseolus vulgaris
Phvul.003G019200 1.0kb upstream 1.0kb upstream 5898 true Chr03: 1853012-1858909 Phaseolus vulgaris
Phvul.003G019200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1857910-1858909 Phaseolus vulgaris
Phvul.003G019200 1.0kb downstream 1.0kb downstream 5898 true Chr03: 1852012-1857909 Phaseolus vulgaris
Phvul.003G019200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1852012-1853011 Phaseolus vulgaris
Phvul.003G019200 2.0kb upstream 2.0kb upstream 6898 true Chr03: 1853012-1859909 Phaseolus vulgaris
Phvul.003G019200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1857910-1859909 Phaseolus vulgaris
Phvul.003G019200 2.0kb downstream 2.0kb downstream 6898 true Chr03: 1851012-1857909 Phaseolus vulgaris
Phvul.003G019200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1851012-1853011 Phaseolus vulgaris
Phvul.003G019200 5.0kb upstream 5.0kb upstream 9898 true Chr03: 1853012-1862909 Phaseolus vulgaris
Phvul.003G019200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1857910-1862909 Phaseolus vulgaris
Phvul.003G019200 5.0kb downstream 5.0kb downstream 9898 true Chr03: 1848012-1857909 Phaseolus vulgaris
Phvul.003G019200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1848012-1853011 Phaseolus vulgaris
Phvul.003G019200 10.0kb upstream 10.0kb upstream 14898 true Chr03: 1853012-1867909 Phaseolus vulgaris
Phvul.003G019200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1857910-1867909 Phaseolus vulgaris
Phvul.003G019200 10.0kb downstream 10.0kb downstream 14898 true Chr03: 1843012-1857909 Phaseolus vulgaris
Phvul.003G019200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1843012-1853011 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304378 5265 Fabidae View MSA
124073632 5270 Rosid View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.23821 0.0 17.5664   High
cufflinks 3.82811 0.0 12.3888    
cufflinks 3.74529 0.0 15.7752    
cufflinks 3.86596 0.0 12.4545    
cufflinks 3.62839 0.0 15.376    
cufflinks 2.17872 0.0 10.8037   Low
cufflinks 3.15406 0.0 14.3551    
cufflinks 3.13449 0.0 14.6012    
cufflinks 3.50978 0.0 11.4009    
cufflinks 4.24046 0.0 17.8215   High
cufflinks 3.5818 0.0 15.4958    

0 Strain