Gene : Phvul.003G020200 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10209//PTHR10209:SF148 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  211
Name:  ? Phvul.003G020200 Secondary Identifier:  ? PAC:37147162
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G020200 0.5kb upstream 0.5kb upstream 2930 true Chr03: 1932530-1935459 Phaseolus vulgaris
Phvul.003G020200 0.5kb upstream 0.5kb upstream 500 false Chr03: 1934960-1935459 Phaseolus vulgaris
Phvul.003G020200 0.5kb downstream 0.5kb downstream 2930 true Chr03: 1932030-1934959 Phaseolus vulgaris
Phvul.003G020200 0.5kb downstream 0.5kb downstream 500 false Chr03: 1932030-1932529 Phaseolus vulgaris
Phvul.003G020200 1.0kb upstream 1.0kb upstream 3430 true Chr03: 1932530-1935959 Phaseolus vulgaris
Phvul.003G020200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1934960-1935959 Phaseolus vulgaris
Phvul.003G020200 1.0kb downstream 1.0kb downstream 3430 true Chr03: 1931530-1934959 Phaseolus vulgaris
Phvul.003G020200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1931530-1932529 Phaseolus vulgaris
Phvul.003G020200 2.0kb upstream 2.0kb upstream 4430 true Chr03: 1932530-1936959 Phaseolus vulgaris
Phvul.003G020200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1934960-1936959 Phaseolus vulgaris
Phvul.003G020200 2.0kb downstream 2.0kb downstream 4430 true Chr03: 1930530-1934959 Phaseolus vulgaris
Phvul.003G020200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1930530-1932529 Phaseolus vulgaris
Phvul.003G020200 5.0kb upstream 5.0kb upstream 7430 true Chr03: 1932530-1939959 Phaseolus vulgaris
Phvul.003G020200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1934960-1939959 Phaseolus vulgaris
Phvul.003G020200 5.0kb downstream 5.0kb downstream 7430 true Chr03: 1927530-1934959 Phaseolus vulgaris
Phvul.003G020200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1927530-1932529 Phaseolus vulgaris
Phvul.003G020200 10.0kb upstream 10.0kb upstream 12430 true Chr03: 1932530-1944959 Phaseolus vulgaris
Phvul.003G020200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1934960-1944959 Phaseolus vulgaris
Phvul.003G020200 10.0kb downstream 10.0kb downstream 12430 true Chr03: 1922530-1934959 Phaseolus vulgaris
Phvul.003G020200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1922530-1932529 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301513 5265 Fabidae View MSA
124071640 5270 Rosid View MSA
123753505 5271 Pentapetalae View MSA
122796711 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 822.757 0.0 3569.26 High High
cufflinks 81.4468 0.0 224.204 High  
cufflinks 24.4344 0.0 63.1937    
cufflinks 37.291 0.0 97.1383 High  
cufflinks 8.21418 0.0 22.341    
cufflinks 11.8465 0.0 31.477    
cufflinks 4.54491 0.0 12.9914    
cufflinks 2.48276 0.0 7.65708   Low
cufflinks 6.16405 0.0 17.1771    
cufflinks 40.1688 0.0 104.931 High  
cufflinks 9.24837 0.0 24.8647    

0 Strain