Gene : Phvul.003G022600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR19297//PTHR19297:SF70 - GLYCOSYLTRANSFERASE 14 FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  235
Name:  ? Phvul.003G022600 Secondary Identifier:  ? PAC:37145571
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G022600 0.5kb upstream 0.5kb upstream 5113 true Chr03: 2145268-2150380 Phaseolus vulgaris
Phvul.003G022600 0.5kb upstream 0.5kb upstream 500 false Chr03: 2149881-2150380 Phaseolus vulgaris
Phvul.003G022600 0.5kb downstream 0.5kb downstream 5113 true Chr03: 2144768-2149880 Phaseolus vulgaris
Phvul.003G022600 0.5kb downstream 0.5kb downstream 500 false Chr03: 2144768-2145267 Phaseolus vulgaris
Phvul.003G022600 1.0kb upstream 1.0kb upstream 5613 true Chr03: 2145268-2150880 Phaseolus vulgaris
Phvul.003G022600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2149881-2150880 Phaseolus vulgaris
Phvul.003G022600 1.0kb downstream 1.0kb downstream 5613 true Chr03: 2144268-2149880 Phaseolus vulgaris
Phvul.003G022600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2144268-2145267 Phaseolus vulgaris
Phvul.003G022600 2.0kb upstream 2.0kb upstream 6613 true Chr03: 2145268-2151880 Phaseolus vulgaris
Phvul.003G022600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2149881-2151880 Phaseolus vulgaris
Phvul.003G022600 2.0kb downstream 2.0kb downstream 6613 true Chr03: 2143268-2149880 Phaseolus vulgaris
Phvul.003G022600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2143268-2145267 Phaseolus vulgaris
Phvul.003G022600 5.0kb upstream 5.0kb upstream 9613 true Chr03: 2145268-2154880 Phaseolus vulgaris
Phvul.003G022600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2149881-2154880 Phaseolus vulgaris
Phvul.003G022600 5.0kb downstream 5.0kb downstream 9613 true Chr03: 2140268-2149880 Phaseolus vulgaris
Phvul.003G022600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2140268-2145267 Phaseolus vulgaris
Phvul.003G022600 10.0kb upstream 10.0kb upstream 14613 true Chr03: 2145268-2159880 Phaseolus vulgaris
Phvul.003G022600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2149881-2159880 Phaseolus vulgaris
Phvul.003G022600 10.0kb downstream 10.0kb downstream 14613 true Chr03: 2135268-2149880 Phaseolus vulgaris
Phvul.003G022600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2135268-2145267 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314268 5265 Fabidae View MSA
124065805 5270 Rosid View MSA
123743478 5271 Pentapetalae View MSA
122795998 5272 Eudicot View MSA
122050409 5273 Angiosperm View MSA
121311894 5274 Embryophyte View MSA
123349128 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.49614 0.0 17.6789   Low
cufflinks 12.8959 0.0 33.5646    
cufflinks 9.34586 0.0 24.7235    
cufflinks 14.6867 0.0 38.105    
cufflinks 14.879 0.0 38.5911   High
cufflinks 10.5941 0.0 27.8162    
cufflinks 11.1304 0.0 29.1347    
cufflinks 11.8535 0.0 30.9347    
cufflinks 14.2061 0.0 36.8703    
cufflinks 8.12523 0.0 21.7427   Low
cufflinks 14.1714 0.0 36.8083    

0 Strain