Gene : Phvul.003G013900 P. vulgaris v2.1
Defline:  (1 of 5) PTHR31614:SF2 - F28N24.16 PROTEIN Genomic Order:  147
Name:  ? Phvul.003G013900 Secondary Identifier:  ? PAC:37145100
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G013900 0.5kb upstream 0.5kb upstream 1450 true Chr03: 1412827-1414276 Phaseolus vulgaris
Phvul.003G013900 0.5kb upstream 0.5kb upstream 500 false Chr03: 1413777-1414276 Phaseolus vulgaris
Phvul.003G013900 0.5kb downstream 0.5kb downstream 1450 true Chr03: 1412327-1413776 Phaseolus vulgaris
Phvul.003G013900 0.5kb downstream 0.5kb downstream 500 false Chr03: 1412327-1412826 Phaseolus vulgaris
Phvul.003G013900 1.0kb upstream 1.0kb upstream 1950 true Chr03: 1412827-1414776 Phaseolus vulgaris
Phvul.003G013900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1413777-1414776 Phaseolus vulgaris
Phvul.003G013900 1.0kb downstream 1.0kb downstream 1950 true Chr03: 1411827-1413776 Phaseolus vulgaris
Phvul.003G013900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1411827-1412826 Phaseolus vulgaris
Phvul.003G013900 2.0kb upstream 2.0kb upstream 2950 true Chr03: 1412827-1415776 Phaseolus vulgaris
Phvul.003G013900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1413777-1415776 Phaseolus vulgaris
Phvul.003G013900 2.0kb downstream 2.0kb downstream 2950 true Chr03: 1410827-1413776 Phaseolus vulgaris
Phvul.003G013900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1410827-1412826 Phaseolus vulgaris
Phvul.003G013900 5.0kb upstream 5.0kb upstream 5950 true Chr03: 1412827-1418776 Phaseolus vulgaris
Phvul.003G013900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1413777-1418776 Phaseolus vulgaris
Phvul.003G013900 5.0kb downstream 5.0kb downstream 5950 true Chr03: 1407827-1413776 Phaseolus vulgaris
Phvul.003G013900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1407827-1412826 Phaseolus vulgaris
Phvul.003G013900 10.0kb upstream 10.0kb upstream 10950 true Chr03: 1412827-1423776 Phaseolus vulgaris
Phvul.003G013900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1413777-1423776 Phaseolus vulgaris
Phvul.003G013900 10.0kb downstream 10.0kb downstream 10950 true Chr03: 1402827-1413776 Phaseolus vulgaris
Phvul.003G013900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1402827-1412826 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314250 5265 Fabidae View MSA
124069142 5270 Rosid View MSA
123747822 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.636 0.0 294.61 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 81.529 0.0 210.806 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0344401 0.0 0.184216 Low  
cufflinks 0.0656917 0.0 0.3259 Low  

0 Strain