Gene : Phvul.003G012400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31003:SF7 - F14J22.20 PROTEIN Genomic Order:  132
Name:  ? Phvul.003G012400 Secondary Identifier:  ? PAC:37144472
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G012400 0.5kb upstream 0.5kb upstream 3424 true Chr03: 1277086-1280509 Phaseolus vulgaris
Phvul.003G012400 0.5kb upstream 0.5kb upstream 500 false Chr03: 1277086-1277585 Phaseolus vulgaris
Phvul.003G012400 0.5kb downstream 0.5kb downstream 3424 true Chr03: 1277586-1281009 Phaseolus vulgaris
Phvul.003G012400 0.5kb downstream 0.5kb downstream 500 false Chr03: 1280510-1281009 Phaseolus vulgaris
Phvul.003G012400 1.0kb upstream 1.0kb upstream 3924 true Chr03: 1276586-1280509 Phaseolus vulgaris
Phvul.003G012400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1276586-1277585 Phaseolus vulgaris
Phvul.003G012400 1.0kb downstream 1.0kb downstream 3924 true Chr03: 1277586-1281509 Phaseolus vulgaris
Phvul.003G012400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1280510-1281509 Phaseolus vulgaris
Phvul.003G012400 2.0kb upstream 2.0kb upstream 4924 true Chr03: 1275586-1280509 Phaseolus vulgaris
Phvul.003G012400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1275586-1277585 Phaseolus vulgaris
Phvul.003G012400 2.0kb downstream 2.0kb downstream 4924 true Chr03: 1277586-1282509 Phaseolus vulgaris
Phvul.003G012400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1280510-1282509 Phaseolus vulgaris
Phvul.003G012400 5.0kb upstream 5.0kb upstream 7924 true Chr03: 1272586-1280509 Phaseolus vulgaris
Phvul.003G012400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1272586-1277585 Phaseolus vulgaris
Phvul.003G012400 5.0kb downstream 5.0kb downstream 7924 true Chr03: 1277586-1285509 Phaseolus vulgaris
Phvul.003G012400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1280510-1285509 Phaseolus vulgaris
Phvul.003G012400 10.0kb upstream 10.0kb upstream 12924 true Chr03: 1267586-1280509 Phaseolus vulgaris
Phvul.003G012400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1267586-1277585 Phaseolus vulgaris
Phvul.003G012400 10.0kb downstream 10.0kb downstream 12924 true Chr03: 1277586-1290509 Phaseolus vulgaris
Phvul.003G012400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1280510-1290509 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253673 5265 Fabidae View MSA
123996176 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43465 0.0 4.67925    
cufflinks 2.47308 0.0 7.60758    
cufflinks 1.73022 0.0 5.51543    
cufflinks 1.43234 0.0 4.71324    
cufflinks 4.81122 0.0 13.815   High
cufflinks 0.109942 0.0 0.453444 Low Low
cufflinks 1.58852 0.0 5.11148    
cufflinks 0.788898 0.0 2.74474    
cufflinks 2.87059 0.0 8.6633    
cufflinks 2.1976 0.0 6.87423    
cufflinks 0.67386 0.0 2.4033    

0 Strain