Gene : Phvul.003G004800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2 Genomic Order:  15
Name:  ? Phvul.003G004800 Secondary Identifier:  ? PAC:37144519
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5271 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G004800 0.5kb upstream 0.5kb upstream 11381 true Chr03: 152772-164152 Phaseolus vulgaris
Phvul.003G004800 0.5kb upstream 0.5kb upstream 500 false Chr03: 152772-153271 Phaseolus vulgaris
Phvul.003G004800 0.5kb downstream 0.5kb downstream 11381 true Chr03: 153272-164652 Phaseolus vulgaris
Phvul.003G004800 0.5kb downstream 0.5kb downstream 500 false Chr03: 164153-164652 Phaseolus vulgaris
Phvul.003G004800 1.0kb upstream 1.0kb upstream 11881 true Chr03: 152272-164152 Phaseolus vulgaris
Phvul.003G004800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 152272-153271 Phaseolus vulgaris
Phvul.003G004800 1.0kb downstream 1.0kb downstream 11881 true Chr03: 153272-165152 Phaseolus vulgaris
Phvul.003G004800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 164153-165152 Phaseolus vulgaris
Phvul.003G004800 2.0kb upstream 2.0kb upstream 12881 true Chr03: 151272-164152 Phaseolus vulgaris
Phvul.003G004800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 151272-153271 Phaseolus vulgaris
Phvul.003G004800 2.0kb downstream 2.0kb downstream 12881 true Chr03: 153272-166152 Phaseolus vulgaris
Phvul.003G004800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 164153-166152 Phaseolus vulgaris
Phvul.003G004800 5.0kb upstream 5.0kb upstream 15881 true Chr03: 148272-164152 Phaseolus vulgaris
Phvul.003G004800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 148272-153271 Phaseolus vulgaris
Phvul.003G004800 5.0kb downstream 5.0kb downstream 15881 true Chr03: 153272-169152 Phaseolus vulgaris
Phvul.003G004800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 164153-169152 Phaseolus vulgaris
Phvul.003G004800 10.0kb upstream 10.0kb upstream 20881 true Chr03: 143272-164152 Phaseolus vulgaris
Phvul.003G004800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 143272-153271 Phaseolus vulgaris
Phvul.003G004800 10.0kb downstream 10.0kb downstream 20881 true Chr03: 153272-174152 Phaseolus vulgaris
Phvul.003G004800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 164153-174152 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304144 5265 Fabidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0207933 0.0 0.103052 Low  
cufflinks 0.0191511 0.0 0.0956525 Low  
cufflinks 12.1999 0.0 32.515   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.253616 0.0 0.998546 Low  
cufflinks 15.7878 0.0 41.4453   High
cufflinks 0.134856 0.0 0.554435 Low  
cufflinks 0.082805 0.0 0.354957 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0108729 0.0 0.0581582 Low Low
cufflinks 0.276448 0.0 1.07923 Low  

0 Strain