Gene : Phvul.002G329000 P. vulgaris v2.1
Defline:  (1 of 1) 1.3.99.5 - 3-oxo-5-alpha-steroid 4-dehydrogenase (acceptor) / Steroid 5-alpha-reductase Genomic Order:  3290
Name:  ? Phvul.002G329000 Secondary Identifier:  ? PAC:37178294
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G329000 0.5kb upstream 0.5kb upstream 4841 true Chr02: 49402806-49407646 Phaseolus vulgaris
Phvul.002G329000 0.5kb upstream 0.5kb upstream 500 false Chr02: 49402806-49403305 Phaseolus vulgaris
Phvul.002G329000 0.5kb downstream 0.5kb downstream 4841 true Chr02: 49403306-49408146 Phaseolus vulgaris
Phvul.002G329000 0.5kb downstream 0.5kb downstream 500 false Chr02: 49407647-49408146 Phaseolus vulgaris
Phvul.002G329000 1.0kb upstream 1.0kb upstream 5341 true Chr02: 49402306-49407646 Phaseolus vulgaris
Phvul.002G329000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49402306-49403305 Phaseolus vulgaris
Phvul.002G329000 1.0kb downstream 1.0kb downstream 5341 true Chr02: 49403306-49408646 Phaseolus vulgaris
Phvul.002G329000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49407647-49408646 Phaseolus vulgaris
Phvul.002G329000 2.0kb upstream 2.0kb upstream 6341 true Chr02: 49401306-49407646 Phaseolus vulgaris
Phvul.002G329000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49401306-49403305 Phaseolus vulgaris
Phvul.002G329000 2.0kb downstream 2.0kb downstream 6341 true Chr02: 49403306-49409646 Phaseolus vulgaris
Phvul.002G329000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49407647-49409646 Phaseolus vulgaris
Phvul.002G329000 5.0kb upstream 5.0kb upstream 9341 true Chr02: 49398306-49407646 Phaseolus vulgaris
Phvul.002G329000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49398306-49403305 Phaseolus vulgaris
Phvul.002G329000 5.0kb downstream 5.0kb downstream 9341 true Chr02: 49403306-49412646 Phaseolus vulgaris
Phvul.002G329000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49407647-49412646 Phaseolus vulgaris
Phvul.002G329000 10.0kb upstream 10.0kb upstream 14341 true Chr02: 49393306-49407646 Phaseolus vulgaris
Phvul.002G329000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49393306-49403305 Phaseolus vulgaris
Phvul.002G329000 10.0kb downstream 10.0kb downstream 14341 true Chr02: 49403306-49417646 Phaseolus vulgaris
Phvul.002G329000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49407647-49417646 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302045 5265 Fabidae View MSA
124062787 5270 Rosid View MSA
123741182 5271 Pentapetalae View MSA
122795415 5272 Eudicot View MSA
122047658 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121351590 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.4871 0.0 145.077 High High
cufflinks 14.0766 0.0 48.8212    
cufflinks 27.7846 0.0 88.6307    
cufflinks 30.5905 0.0 97.4854   High
cufflinks 10.9557 0.0 40.3167    
cufflinks 22.2258 0.0 72.159    
cufflinks 11.0804 0.0 40.3821    
cufflinks 6.14486 0.0 21.6928   Low
cufflinks 16.1337 0.0 55.1487    
cufflinks 19.7744 0.0 65.0221    
cufflinks 10.1674 0.0 32.7332    

0 Strain