Gene : Phvul.002G331100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15454 - NISCHARIN RELATED Genomic Order:  3311
Name:  ? Phvul.002G331100 Secondary Identifier:  ? PAC:37175427
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G331100 0.5kb upstream 0.5kb upstream 9134 true Chr02: 49505947-49515080 Phaseolus vulgaris
Phvul.002G331100 0.5kb upstream 0.5kb upstream 500 false Chr02: 49505947-49506446 Phaseolus vulgaris
Phvul.002G331100 0.5kb downstream 0.5kb downstream 9134 true Chr02: 49506447-49515580 Phaseolus vulgaris
Phvul.002G331100 0.5kb downstream 0.5kb downstream 500 false Chr02: 49515081-49515580 Phaseolus vulgaris
Phvul.002G331100 1.0kb upstream 1.0kb upstream 9634 true Chr02: 49505447-49515080 Phaseolus vulgaris
Phvul.002G331100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49505447-49506446 Phaseolus vulgaris
Phvul.002G331100 1.0kb downstream 1.0kb downstream 9634 true Chr02: 49506447-49516080 Phaseolus vulgaris
Phvul.002G331100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49515081-49516080 Phaseolus vulgaris
Phvul.002G331100 2.0kb upstream 2.0kb upstream 10634 true Chr02: 49504447-49515080 Phaseolus vulgaris
Phvul.002G331100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49504447-49506446 Phaseolus vulgaris
Phvul.002G331100 2.0kb downstream 2.0kb downstream 10634 true Chr02: 49506447-49517080 Phaseolus vulgaris
Phvul.002G331100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49515081-49517080 Phaseolus vulgaris
Phvul.002G331100 5.0kb upstream 5.0kb upstream 13634 true Chr02: 49501447-49515080 Phaseolus vulgaris
Phvul.002G331100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49501447-49506446 Phaseolus vulgaris
Phvul.002G331100 5.0kb downstream 5.0kb downstream 13634 true Chr02: 49506447-49520080 Phaseolus vulgaris
Phvul.002G331100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49515081-49520080 Phaseolus vulgaris
Phvul.002G331100 10.0kb upstream 10.0kb upstream 18634 true Chr02: 49496447-49515080 Phaseolus vulgaris
Phvul.002G331100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49496447-49506446 Phaseolus vulgaris
Phvul.002G331100 10.0kb downstream 10.0kb downstream 18634 true Chr02: 49506447-49525080 Phaseolus vulgaris
Phvul.002G331100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49515081-49525080 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304834 5265 Fabidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91656 0.0 19.5506   Low
cufflinks 5.58164 0.0 20.9755    
cufflinks 10.5904 0.0 37.7038    
cufflinks 3.21497 0.0 12.7251   Low
cufflinks 8.06528 0.0 28.5    
cufflinks 7.99617 0.0 29.2658    
cufflinks 11.2698 0.0 40.1911    
cufflinks 10.8835 0.0 39.151    
cufflinks 10.1103 0.0 37.5613    
cufflinks 11.1583 0.0 40.8223    
cufflinks 6.39082 0.0 25.2492    

0 Strain