Gene : Phvul.002G330200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3302
Name:  ? Phvul.002G330200 Secondary Identifier:  ? PAC:37177151
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G330200 0.5kb upstream 0.5kb upstream 1643 true Chr02: 49467573-49469215 Phaseolus vulgaris
Phvul.002G330200 0.5kb upstream 0.5kb upstream 500 false Chr02: 49467573-49468072 Phaseolus vulgaris
Phvul.002G330200 0.5kb downstream 0.5kb downstream 1643 true Chr02: 49468073-49469715 Phaseolus vulgaris
Phvul.002G330200 0.5kb downstream 0.5kb downstream 500 false Chr02: 49469216-49469715 Phaseolus vulgaris
Phvul.002G330200 1.0kb upstream 1.0kb upstream 2143 true Chr02: 49467073-49469215 Phaseolus vulgaris
Phvul.002G330200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49467073-49468072 Phaseolus vulgaris
Phvul.002G330200 1.0kb downstream 1.0kb downstream 2143 true Chr02: 49468073-49470215 Phaseolus vulgaris
Phvul.002G330200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49469216-49470215 Phaseolus vulgaris
Phvul.002G330200 2.0kb upstream 2.0kb upstream 3143 true Chr02: 49466073-49469215 Phaseolus vulgaris
Phvul.002G330200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49466073-49468072 Phaseolus vulgaris
Phvul.002G330200 2.0kb downstream 2.0kb downstream 3143 true Chr02: 49468073-49471215 Phaseolus vulgaris
Phvul.002G330200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49469216-49471215 Phaseolus vulgaris
Phvul.002G330200 5.0kb upstream 5.0kb upstream 6143 true Chr02: 49463073-49469215 Phaseolus vulgaris
Phvul.002G330200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49463073-49468072 Phaseolus vulgaris
Phvul.002G330200 5.0kb downstream 5.0kb downstream 6143 true Chr02: 49468073-49474215 Phaseolus vulgaris
Phvul.002G330200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49469216-49474215 Phaseolus vulgaris
Phvul.002G330200 10.0kb upstream 10.0kb upstream 11143 true Chr02: 49458073-49469215 Phaseolus vulgaris
Phvul.002G330200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49458073-49468072 Phaseolus vulgaris
Phvul.002G330200 10.0kb downstream 10.0kb downstream 11143 true Chr02: 49468073-49479215 Phaseolus vulgaris
Phvul.002G330200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49469216-49479215 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311894 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.51846 0.0 8.70422    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.89976 0.0 18.6297    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain