Gene : Phvul.002G317600 P. vulgaris v2.1
Genomic Order:  3169 Name:  ? Phvul.002G317600
Secondary Identifier:  ? PAC:37177757
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G317600 0.5kb upstream 0.5kb upstream 1879 true Chr02: 48389444-48391322 Phaseolus vulgaris
Phvul.002G317600 0.5kb upstream 0.5kb upstream 500 false Chr02: 48389444-48389943 Phaseolus vulgaris
Phvul.002G317600 0.5kb downstream 0.5kb downstream 1879 true Chr02: 48389944-48391822 Phaseolus vulgaris
Phvul.002G317600 0.5kb downstream 0.5kb downstream 500 false Chr02: 48391323-48391822 Phaseolus vulgaris
Phvul.002G317600 1.0kb upstream 1.0kb upstream 2379 true Chr02: 48388944-48391322 Phaseolus vulgaris
Phvul.002G317600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48388944-48389943 Phaseolus vulgaris
Phvul.002G317600 1.0kb downstream 1.0kb downstream 2379 true Chr02: 48389944-48392322 Phaseolus vulgaris
Phvul.002G317600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48391323-48392322 Phaseolus vulgaris
Phvul.002G317600 2.0kb upstream 2.0kb upstream 3379 true Chr02: 48387944-48391322 Phaseolus vulgaris
Phvul.002G317600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48387944-48389943 Phaseolus vulgaris
Phvul.002G317600 2.0kb downstream 2.0kb downstream 3379 true Chr02: 48389944-48393322 Phaseolus vulgaris
Phvul.002G317600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48391323-48393322 Phaseolus vulgaris
Phvul.002G317600 5.0kb upstream 5.0kb upstream 6379 true Chr02: 48384944-48391322 Phaseolus vulgaris
Phvul.002G317600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48384944-48389943 Phaseolus vulgaris
Phvul.002G317600 5.0kb downstream 5.0kb downstream 6379 true Chr02: 48389944-48396322 Phaseolus vulgaris
Phvul.002G317600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48391323-48396322 Phaseolus vulgaris
Phvul.002G317600 10.0kb upstream 10.0kb upstream 11379 true Chr02: 48379944-48391322 Phaseolus vulgaris
Phvul.002G317600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48379944-48389943 Phaseolus vulgaris
Phvul.002G317600 10.0kb downstream 10.0kb downstream 11379 true Chr02: 48389944-48401322 Phaseolus vulgaris
Phvul.002G317600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48391323-48401322 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314034 5265 Fabidae View MSA
124064398 5270 Rosid View MSA
123746732 5271 Pentapetalae View MSA
122786820 5272 Eudicot View MSA
122047207 5273 Angiosperm View MSA
121310707 5274 Embryophyte View MSA
123348126 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.283083 0.0 1.14702 Low  
cufflinks 0.433399 0.0 1.69989 Low  
cufflinks 0.0580993 0.0 0.271365 Low Low
cufflinks 0.200437 0.0 0.837733 Low  
cufflinks 0.244529 0.0 1.00637 Low  
cufflinks 0.137392 0.0 0.592833 Low  
cufflinks 0.889327 0.0 3.297    
cufflinks 1.25602 0.0 4.49427   High
cufflinks 1.20417 0.0 4.35523   High
cufflinks 0.0749337 0.0 0.343635 Low Low
cufflinks 0.928777 0.0 3.43993    

0 Strain