Gene : Phvul.002G313000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33057:SF24 - OVATE FAMILY PROTEIN 8 Genomic Order:  3123
Name:  ? Phvul.002G313000 Secondary Identifier:  ? PAC:37178050
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G313000 0.5kb upstream 0.5kb upstream 1478 true Chr02: 47994607-47996084 Phaseolus vulgaris
Phvul.002G313000 0.5kb upstream 0.5kb upstream 500 false Chr02: 47994607-47995106 Phaseolus vulgaris
Phvul.002G313000 0.5kb downstream 0.5kb downstream 1478 true Chr02: 47995107-47996584 Phaseolus vulgaris
Phvul.002G313000 0.5kb downstream 0.5kb downstream 500 false Chr02: 47996085-47996584 Phaseolus vulgaris
Phvul.002G313000 1.0kb upstream 1.0kb upstream 1978 true Chr02: 47994107-47996084 Phaseolus vulgaris
Phvul.002G313000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47994107-47995106 Phaseolus vulgaris
Phvul.002G313000 1.0kb downstream 1.0kb downstream 1978 true Chr02: 47995107-47997084 Phaseolus vulgaris
Phvul.002G313000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47996085-47997084 Phaseolus vulgaris
Phvul.002G313000 2.0kb upstream 2.0kb upstream 2978 true Chr02: 47993107-47996084 Phaseolus vulgaris
Phvul.002G313000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47993107-47995106 Phaseolus vulgaris
Phvul.002G313000 2.0kb downstream 2.0kb downstream 2978 true Chr02: 47995107-47998084 Phaseolus vulgaris
Phvul.002G313000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47996085-47998084 Phaseolus vulgaris
Phvul.002G313000 5.0kb upstream 5.0kb upstream 5978 true Chr02: 47990107-47996084 Phaseolus vulgaris
Phvul.002G313000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47990107-47995106 Phaseolus vulgaris
Phvul.002G313000 5.0kb downstream 5.0kb downstream 5978 true Chr02: 47995107-48001084 Phaseolus vulgaris
Phvul.002G313000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47996085-48001084 Phaseolus vulgaris
Phvul.002G313000 10.0kb upstream 10.0kb upstream 10978 true Chr02: 47985107-47996084 Phaseolus vulgaris
Phvul.002G313000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47985107-47995106 Phaseolus vulgaris
Phvul.002G313000 10.0kb downstream 10.0kb downstream 10978 true Chr02: 47995107-48006084 Phaseolus vulgaris
Phvul.002G313000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47996085-48006084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303425 5265 Fabidae View MSA
124060850 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.484 0.0 37.4132    
cufflinks 20.2526 0.0 54.3479   High
cufflinks 0.126862 0.0 0.552923 Low Low
cufflinks 3.90179 0.0 12.2349    
cufflinks 6.25413 0.0 18.7482    
cufflinks 2.89957 0.0 9.50981    
cufflinks 5.82457 0.0 17.4731    
cufflinks 5.35749 0.0 16.3582    
cufflinks 3.73943 0.0 11.7869    
cufflinks 5.56061 0.0 17.0294    
cufflinks 7.40574 0.0 21.7959    

0 Strain