Gene : Phvul.002G317100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15495//PTHR15495:SF17 - NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3164
Name:  ? Phvul.002G317100 Secondary Identifier:  ? PAC:37178370
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G317100 0.5kb upstream 0.5kb upstream 1603 true Chr02: 48363705-48365307 Phaseolus vulgaris
Phvul.002G317100 0.5kb upstream 0.5kb upstream 500 false Chr02: 48363705-48364204 Phaseolus vulgaris
Phvul.002G317100 0.5kb downstream 0.5kb downstream 1603 true Chr02: 48364205-48365807 Phaseolus vulgaris
Phvul.002G317100 0.5kb downstream 0.5kb downstream 500 false Chr02: 48365308-48365807 Phaseolus vulgaris
Phvul.002G317100 1.0kb upstream 1.0kb upstream 2103 true Chr02: 48363205-48365307 Phaseolus vulgaris
Phvul.002G317100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48363205-48364204 Phaseolus vulgaris
Phvul.002G317100 1.0kb downstream 1.0kb downstream 2103 true Chr02: 48364205-48366307 Phaseolus vulgaris
Phvul.002G317100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48365308-48366307 Phaseolus vulgaris
Phvul.002G317100 2.0kb upstream 2.0kb upstream 3103 true Chr02: 48362205-48365307 Phaseolus vulgaris
Phvul.002G317100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48362205-48364204 Phaseolus vulgaris
Phvul.002G317100 2.0kb downstream 2.0kb downstream 3103 true Chr02: 48364205-48367307 Phaseolus vulgaris
Phvul.002G317100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48365308-48367307 Phaseolus vulgaris
Phvul.002G317100 5.0kb upstream 5.0kb upstream 6103 true Chr02: 48359205-48365307 Phaseolus vulgaris
Phvul.002G317100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48359205-48364204 Phaseolus vulgaris
Phvul.002G317100 5.0kb downstream 5.0kb downstream 6103 true Chr02: 48364205-48370307 Phaseolus vulgaris
Phvul.002G317100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48365308-48370307 Phaseolus vulgaris
Phvul.002G317100 10.0kb upstream 10.0kb upstream 11103 true Chr02: 48354205-48365307 Phaseolus vulgaris
Phvul.002G317100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48354205-48364204 Phaseolus vulgaris
Phvul.002G317100 10.0kb downstream 10.0kb downstream 11103 true Chr02: 48364205-48375307 Phaseolus vulgaris
Phvul.002G317100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48365308-48375307 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302848 5265 Fabidae View MSA
124065569 5270 Rosid View MSA
123747210 5271 Pentapetalae View MSA
122789939 5272 Eudicot View MSA
122045656 5273 Angiosperm View MSA
121347339 5274 Embryophyte View MSA
123426841 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.89698 0.0 22.3153    
cufflinks 8.85878 0.0 24.8106    
cufflinks 67.8888 0.0 178.514 High High
cufflinks 5.75514 0.0 16.7692    
cufflinks 7.06681 0.0 20.1298    
cufflinks 28.8175 0.0 74.6633   High
cufflinks 0.304655 0.0 1.19402 Low Low
cufflinks 0.57395 0.0 2.15115   Low
cufflinks 0.393391 0.0 1.51288 Low Low
cufflinks 3.67119 0.0 11.3234    
cufflinks 10.5016 0.0 28.8708    

0 Strain