Gene : Phvul.003G098200 P. vulgaris v2.1
Defline:  (1 of 1) 2.7.9.1 - Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase Genomic Order:  1032
Name:  ? Phvul.003G098200 Secondary Identifier:  ? PAC:37145108
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-241 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6549 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7115 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7117 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G098200 0.5kb upstream 0.5kb upstream 7890 true Chr03: 25181260-25189149 Phaseolus vulgaris
Phvul.003G098200 0.5kb upstream 0.5kb upstream 500 false Chr03: 25181260-25181759 Phaseolus vulgaris
Phvul.003G098200 0.5kb downstream 0.5kb downstream 7890 true Chr03: 25181760-25189649 Phaseolus vulgaris
Phvul.003G098200 0.5kb downstream 0.5kb downstream 500 false Chr03: 25189150-25189649 Phaseolus vulgaris
Phvul.003G098200 1.0kb upstream 1.0kb upstream 8390 true Chr03: 25180760-25189149 Phaseolus vulgaris
Phvul.003G098200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25180760-25181759 Phaseolus vulgaris
Phvul.003G098200 1.0kb downstream 1.0kb downstream 8390 true Chr03: 25181760-25190149 Phaseolus vulgaris
Phvul.003G098200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25189150-25190149 Phaseolus vulgaris
Phvul.003G098200 2.0kb upstream 2.0kb upstream 9390 true Chr03: 25179760-25189149 Phaseolus vulgaris
Phvul.003G098200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25179760-25181759 Phaseolus vulgaris
Phvul.003G098200 2.0kb downstream 2.0kb downstream 9390 true Chr03: 25181760-25191149 Phaseolus vulgaris
Phvul.003G098200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25189150-25191149 Phaseolus vulgaris
Phvul.003G098200 5.0kb upstream 5.0kb upstream 12390 true Chr03: 25176760-25189149 Phaseolus vulgaris
Phvul.003G098200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25176760-25181759 Phaseolus vulgaris
Phvul.003G098200 5.0kb downstream 5.0kb downstream 12390 true Chr03: 25181760-25194149 Phaseolus vulgaris
Phvul.003G098200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25189150-25194149 Phaseolus vulgaris
Phvul.003G098200 10.0kb upstream 10.0kb upstream 17390 true Chr03: 25171760-25189149 Phaseolus vulgaris
Phvul.003G098200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25171760-25181759 Phaseolus vulgaris
Phvul.003G098200 10.0kb downstream 10.0kb downstream 17390 true Chr03: 25181760-25199149 Phaseolus vulgaris
Phvul.003G098200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25189150-25199149 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313644 5265 Fabidae View MSA
124064230 5270 Rosid View MSA
123741030 5271 Pentapetalae View MSA
122790870 5272 Eudicot View MSA
122045986 5273 Angiosperm View MSA
121345134 5274 Embryophyte View MSA
123425418 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.9706 0.0 92.6593   High
cufflinks 18.0059 0.0 58.3655    
cufflinks 7.30742 0.0 20.7167    
cufflinks 2.44716 0.0 8.3935    
cufflinks 14.1957 0.0 45.38    
cufflinks 1.71862 0.0 6.23616    
cufflinks 0.530819 0.0 2.06246 Low Low
cufflinks 0.145072 0.0 1.04722 Low Low
cufflinks 0.851266 0.0 2.9215    
cufflinks 16.5399 0.0 53.1417    
cufflinks 11.4864 0.0 32.0994    

0 Strain