Gene : Phvul.003G100600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10110:SF117 - SODIUM/HYDROGEN EXCHANGER 1-RELATED Genomic Order:  1072
Name:  ? Phvul.003G100600 Secondary Identifier:  ? PAC:37147707
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G100600 0.5kb upstream 0.5kb upstream 4418 true Chr03: 27057887-27062304 Phaseolus vulgaris
Phvul.003G100600 0.5kb upstream 0.5kb upstream 500 false Chr03: 27061805-27062304 Phaseolus vulgaris
Phvul.003G100600 0.5kb downstream 0.5kb downstream 4418 true Chr03: 27057387-27061804 Phaseolus vulgaris
Phvul.003G100600 0.5kb downstream 0.5kb downstream 500 false Chr03: 27057387-27057886 Phaseolus vulgaris
Phvul.003G100600 1.0kb upstream 1.0kb upstream 4918 true Chr03: 27057887-27062804 Phaseolus vulgaris
Phvul.003G100600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27061805-27062804 Phaseolus vulgaris
Phvul.003G100600 1.0kb downstream 1.0kb downstream 4918 true Chr03: 27056887-27061804 Phaseolus vulgaris
Phvul.003G100600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27056887-27057886 Phaseolus vulgaris
Phvul.003G100600 2.0kb upstream 2.0kb upstream 5918 true Chr03: 27057887-27063804 Phaseolus vulgaris
Phvul.003G100600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27061805-27063804 Phaseolus vulgaris
Phvul.003G100600 2.0kb downstream 2.0kb downstream 5918 true Chr03: 27055887-27061804 Phaseolus vulgaris
Phvul.003G100600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27055887-27057886 Phaseolus vulgaris
Phvul.003G100600 5.0kb upstream 5.0kb upstream 8918 true Chr03: 27057887-27066804 Phaseolus vulgaris
Phvul.003G100600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27061805-27066804 Phaseolus vulgaris
Phvul.003G100600 5.0kb downstream 5.0kb downstream 8918 true Chr03: 27052887-27061804 Phaseolus vulgaris
Phvul.003G100600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27052887-27057886 Phaseolus vulgaris
Phvul.003G100600 10.0kb upstream 10.0kb upstream 13918 true Chr03: 27057887-27071804 Phaseolus vulgaris
Phvul.003G100600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27061805-27071804 Phaseolus vulgaris
Phvul.003G100600 10.0kb downstream 10.0kb downstream 13918 true Chr03: 27047887-27061804 Phaseolus vulgaris
Phvul.003G100600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27047887-27057886 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309085 5265 Fabidae View MSA
124071378 5270 Rosid View MSA
123745225 5271 Pentapetalae View MSA
122787432 5272 Eudicot View MSA
122047449 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.557286 0.0 2.02385    
cufflinks 3.09734 0.0 9.34893    
cufflinks 1.0272 0.0 3.50488    
cufflinks 0.354688 0.0 1.34694 Low Low
cufflinks 2.06638 0.0 6.55476    
cufflinks 1.9742 0.0 6.2762    
cufflinks 3.59718 0.0 10.7007   High
cufflinks 0.563127 0.0 2.04254    
cufflinks 3.79736 0.0 11.2681   High
cufflinks 0.398104 0.0 1.49051   Low
cufflinks 3.87558 0.0 11.4564   High

0 Strain