Gene : Phvul.003G091200 P. vulgaris v2.1
Defline:  (1 of 7) KOG4249 - Uncharacterized conserved protein Genomic Order:  957
Name:  ? Phvul.003G091200 Secondary Identifier:  ? PAC:37147174
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G091200 0.5kb upstream 0.5kb upstream 5429 true Chr03: 21714321-21719749 Phaseolus vulgaris
Phvul.003G091200 0.5kb upstream 0.5kb upstream 500 false Chr03: 21714321-21714820 Phaseolus vulgaris
Phvul.003G091200 0.5kb downstream 0.5kb downstream 5429 true Chr03: 21714821-21720249 Phaseolus vulgaris
Phvul.003G091200 0.5kb downstream 0.5kb downstream 500 false Chr03: 21719750-21720249 Phaseolus vulgaris
Phvul.003G091200 1.0kb upstream 1.0kb upstream 5929 true Chr03: 21713821-21719749 Phaseolus vulgaris
Phvul.003G091200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21713821-21714820 Phaseolus vulgaris
Phvul.003G091200 1.0kb downstream 1.0kb downstream 5929 true Chr03: 21714821-21720749 Phaseolus vulgaris
Phvul.003G091200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21719750-21720749 Phaseolus vulgaris
Phvul.003G091200 2.0kb upstream 2.0kb upstream 6929 true Chr03: 21712821-21719749 Phaseolus vulgaris
Phvul.003G091200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21712821-21714820 Phaseolus vulgaris
Phvul.003G091200 2.0kb downstream 2.0kb downstream 6929 true Chr03: 21714821-21721749 Phaseolus vulgaris
Phvul.003G091200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21719750-21721749 Phaseolus vulgaris
Phvul.003G091200 5.0kb upstream 5.0kb upstream 9929 true Chr03: 21709821-21719749 Phaseolus vulgaris
Phvul.003G091200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21709821-21714820 Phaseolus vulgaris
Phvul.003G091200 5.0kb downstream 5.0kb downstream 9929 true Chr03: 21714821-21724749 Phaseolus vulgaris
Phvul.003G091200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21719750-21724749 Phaseolus vulgaris
Phvul.003G091200 10.0kb upstream 10.0kb upstream 14929 true Chr03: 21704821-21719749 Phaseolus vulgaris
Phvul.003G091200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21704821-21714820 Phaseolus vulgaris
Phvul.003G091200 10.0kb downstream 10.0kb downstream 14929 true Chr03: 21714821-21729749 Phaseolus vulgaris
Phvul.003G091200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21719750-21729749 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307461 5265 Fabidae View MSA
124064766 5270 Rosid View MSA
123744399 5271 Pentapetalae View MSA
122790048 5272 Eudicot View MSA
122042067 5273 Angiosperm View MSA
121346127 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0091 0.0 28.9854   Low
cufflinks 21.2689 0.0 54.9764    
cufflinks 33.7446 0.0 88.1189   High
cufflinks 25.6972 0.0 66.5282    
cufflinks 21.7921 0.0 56.3302    
cufflinks 32.9949 0.0 86.0594 High High
cufflinks 18.6752 0.0 48.2993    
cufflinks 20.1275 0.0 52.0269    
cufflinks 20.1743 0.0 52.1553    
cufflinks 22.06 0.0 57.0296    
cufflinks 26.3496 0.0 68.2415    

0 Strain