Gene : Phvul.003G091500 P. vulgaris v2.1
Defline:  (1 of 1) K10686 - ubiquitin-activating enzyme E1 C (UBE1C, UBA3) Genomic Order:  954
Name:  ? Phvul.003G091500 Secondary Identifier:  ? PAC:37145785
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G091500 0.5kb upstream 0.5kb upstream 5121 true Chr03: 21681122-21686242 Phaseolus vulgaris
Phvul.003G091500 0.5kb upstream 0.5kb upstream 500 false Chr03: 21681122-21681621 Phaseolus vulgaris
Phvul.003G091500 0.5kb downstream 0.5kb downstream 5121 true Chr03: 21681622-21686742 Phaseolus vulgaris
Phvul.003G091500 0.5kb downstream 0.5kb downstream 500 false Chr03: 21686243-21686742 Phaseolus vulgaris
Phvul.003G091500 1.0kb upstream 1.0kb upstream 5621 true Chr03: 21680622-21686242 Phaseolus vulgaris
Phvul.003G091500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21680622-21681621 Phaseolus vulgaris
Phvul.003G091500 1.0kb downstream 1.0kb downstream 5621 true Chr03: 21681622-21687242 Phaseolus vulgaris
Phvul.003G091500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21686243-21687242 Phaseolus vulgaris
Phvul.003G091500 2.0kb upstream 2.0kb upstream 6621 true Chr03: 21679622-21686242 Phaseolus vulgaris
Phvul.003G091500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21679622-21681621 Phaseolus vulgaris
Phvul.003G091500 2.0kb downstream 2.0kb downstream 6621 true Chr03: 21681622-21688242 Phaseolus vulgaris
Phvul.003G091500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21686243-21688242 Phaseolus vulgaris
Phvul.003G091500 5.0kb upstream 5.0kb upstream 9621 true Chr03: 21676622-21686242 Phaseolus vulgaris
Phvul.003G091500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21676622-21681621 Phaseolus vulgaris
Phvul.003G091500 5.0kb downstream 5.0kb downstream 9621 true Chr03: 21681622-21691242 Phaseolus vulgaris
Phvul.003G091500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21686243-21691242 Phaseolus vulgaris
Phvul.003G091500 10.0kb upstream 10.0kb upstream 14621 true Chr03: 21671622-21686242 Phaseolus vulgaris
Phvul.003G091500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21671622-21681621 Phaseolus vulgaris
Phvul.003G091500 10.0kb downstream 10.0kb downstream 14621 true Chr03: 21681622-21696242 Phaseolus vulgaris
Phvul.003G091500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21686243-21696242 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301386 5265 Fabidae View MSA
124063511 5270 Rosid View MSA
123743398 5271 Pentapetalae View MSA
122788889 5272 Eudicot View MSA
122047058 5273 Angiosperm View MSA
121346595 5274 Embryophyte View MSA
123424978 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3596 0.0 34.7705    
cufflinks 14.1865 0.0 36.8582    
cufflinks 17.0881 0.0 44.2148    
cufflinks 15.5885 0.0 40.4761    
cufflinks 13.9085 0.0 36.2193    
cufflinks 12.4008 0.0 32.3861    
cufflinks 11.358 0.0 29.7908   Low
cufflinks 11.0905 0.0 29.0542   Low
cufflinks 11.4707 0.0 30.1155    
cufflinks 22.9535 0.0 59.3809   High
cufflinks 14.8646 0.0 38.61    

0 Strain