Gene : Phvul.003G090501 P. vulgaris v2.1
Defline:  (1 of 91) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  965
Name:  ? Phvul.003G090501 Secondary Identifier:  ? PAC:37148197
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G090501 0.5kb upstream 0.5kb upstream 3208 true Chr03: 21896080-21899287 Phaseolus vulgaris
Phvul.003G090501 0.5kb upstream 0.5kb upstream 500 false Chr03: 21898788-21899287 Phaseolus vulgaris
Phvul.003G090501 0.5kb downstream 0.5kb downstream 3208 true Chr03: 21895580-21898787 Phaseolus vulgaris
Phvul.003G090501 0.5kb downstream 0.5kb downstream 500 false Chr03: 21895580-21896079 Phaseolus vulgaris
Phvul.003G090501 1.0kb upstream 1.0kb upstream 3708 true Chr03: 21896080-21899787 Phaseolus vulgaris
Phvul.003G090501 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21898788-21899787 Phaseolus vulgaris
Phvul.003G090501 1.0kb downstream 1.0kb downstream 3708 true Chr03: 21895080-21898787 Phaseolus vulgaris
Phvul.003G090501 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21895080-21896079 Phaseolus vulgaris
Phvul.003G090501 2.0kb upstream 2.0kb upstream 4708 true Chr03: 21896080-21900787 Phaseolus vulgaris
Phvul.003G090501 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21898788-21900787 Phaseolus vulgaris
Phvul.003G090501 2.0kb downstream 2.0kb downstream 4708 true Chr03: 21894080-21898787 Phaseolus vulgaris
Phvul.003G090501 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21894080-21896079 Phaseolus vulgaris
Phvul.003G090501 5.0kb upstream 5.0kb upstream 7708 true Chr03: 21896080-21903787 Phaseolus vulgaris
Phvul.003G090501 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21898788-21903787 Phaseolus vulgaris
Phvul.003G090501 5.0kb downstream 5.0kb downstream 7708 true Chr03: 21891080-21898787 Phaseolus vulgaris
Phvul.003G090501 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21891080-21896079 Phaseolus vulgaris
Phvul.003G090501 10.0kb upstream 10.0kb upstream 12708 true Chr03: 21896080-21908787 Phaseolus vulgaris
Phvul.003G090501 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21898788-21908787 Phaseolus vulgaris
Phvul.003G090501 10.0kb downstream 10.0kb downstream 12708 true Chr03: 21886080-21898787 Phaseolus vulgaris
Phvul.003G090501 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21886080-21896079 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302835 5265 Fabidae View MSA
124061358 5270 Rosid View MSA
123741479 5271 Pentapetalae View MSA
122788973 5272 Eudicot View MSA
122049056 5273 Angiosperm View MSA
121351099 5274 Embryophyte View MSA
123382006 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.25847 0.0 4.24033    
cufflinks 3.92111 0.0 11.5825    
cufflinks 22.2776 0.0 57.6806   High
cufflinks 2.2584 0.0 7.09389    
cufflinks 4.22633 0.0 12.3822    
cufflinks 9.48831 0.0 25.7436    
cufflinks 0.469775 0.0 1.73499 Low  
cufflinks 2.53449 0.0 7.84282    
cufflinks 0.021869 0.0 0.106221 Low Low
cufflinks 3.66788 0.0 10.9499    
cufflinks 3.23062 0.0 9.76792    

0 Strain