Gene : Phvul.003G079100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11214:SF109 - BETA-1,3-GALACTOSYLTRANSFERASE 1-RELATED Genomic Order:  794
Name:  ? Phvul.003G079100 Secondary Identifier:  ? PAC:37147441
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G079100 0.5kb upstream 0.5kb upstream 6645 true Chr03: 12706789-12713433 Phaseolus vulgaris
Phvul.003G079100 0.5kb upstream 0.5kb upstream 500 false Chr03: 12706789-12707288 Phaseolus vulgaris
Phvul.003G079100 0.5kb downstream 0.5kb downstream 6645 true Chr03: 12707289-12713933 Phaseolus vulgaris
Phvul.003G079100 0.5kb downstream 0.5kb downstream 500 false Chr03: 12713434-12713933 Phaseolus vulgaris
Phvul.003G079100 1.0kb upstream 1.0kb upstream 7145 true Chr03: 12706289-12713433 Phaseolus vulgaris
Phvul.003G079100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12706289-12707288 Phaseolus vulgaris
Phvul.003G079100 1.0kb downstream 1.0kb downstream 7145 true Chr03: 12707289-12714433 Phaseolus vulgaris
Phvul.003G079100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12713434-12714433 Phaseolus vulgaris
Phvul.003G079100 2.0kb upstream 2.0kb upstream 8145 true Chr03: 12705289-12713433 Phaseolus vulgaris
Phvul.003G079100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12705289-12707288 Phaseolus vulgaris
Phvul.003G079100 2.0kb downstream 2.0kb downstream 8145 true Chr03: 12707289-12715433 Phaseolus vulgaris
Phvul.003G079100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12713434-12715433 Phaseolus vulgaris
Phvul.003G079100 5.0kb upstream 5.0kb upstream 11145 true Chr03: 12702289-12713433 Phaseolus vulgaris
Phvul.003G079100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12702289-12707288 Phaseolus vulgaris
Phvul.003G079100 5.0kb downstream 5.0kb downstream 11145 true Chr03: 12707289-12718433 Phaseolus vulgaris
Phvul.003G079100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12713434-12718433 Phaseolus vulgaris
Phvul.003G079100 10.0kb upstream 10.0kb upstream 16145 true Chr03: 12697289-12713433 Phaseolus vulgaris
Phvul.003G079100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12697289-12707288 Phaseolus vulgaris
Phvul.003G079100 10.0kb downstream 10.0kb downstream 16145 true Chr03: 12707289-12723433 Phaseolus vulgaris
Phvul.003G079100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12713434-12723433 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782620 5273 Angiosperm View MSA
122314247 5265 Fabidae View MSA
124038080 5270 Rosid View MSA
123753371 5271 Pentapetalae View MSA
122775078 5272 Eudicot View MSA
121349235 5274 Embryophyte View MSA
123381228 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.89163 0.0 5.80366   Low
cufflinks 7.58341 0.0 20.296    
cufflinks 5.55449 0.0 15.2372    
cufflinks 3.97931 0.0 11.3884    
cufflinks 6.90366 0.0 18.7545    
cufflinks 8.16156 0.0 21.7074    
cufflinks 6.24544 0.0 16.934    
cufflinks 3.65863 0.0 10.3723    
cufflinks 3.99434 0.0 11.2976    
cufflinks 5.19436 0.0 14.3967    
cufflinks 9.24345 0.0 24.4847   High

0 Strain