Gene : Phvul.003G079600 P. vulgaris v2.1

Defline:  (1 of 5) 4.2.1.51//4.2.1.91 - Arogenate dehydratase / Carboxycyclohexadienyl dehydratase Genomic Order:  799
Name:  ? Phvul.003G079600 Secondary Identifier:  ? PAC:37145164

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3462 Phaseolus vulgaris pathologic  
Pvulgaris PWY-3481 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G079600 0.5kb upstream 0.5kb upstream 10286 true Chr03: 12839196-12849481 Phaseolus vulgaris
Phvul.003G079600 0.5kb upstream 0.5kb upstream 500 false Chr03: 12839196-12839695 Phaseolus vulgaris
Phvul.003G079600 0.5kb downstream 0.5kb downstream 10286 true Chr03: 12839696-12849981 Phaseolus vulgaris
Phvul.003G079600 0.5kb downstream 0.5kb downstream 500 false Chr03: 12849482-12849981 Phaseolus vulgaris
Phvul.003G079600 1.0kb upstream 1.0kb upstream 10786 true Chr03: 12838696-12849481 Phaseolus vulgaris
Phvul.003G079600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12838696-12839695 Phaseolus vulgaris
Phvul.003G079600 1.0kb downstream 1.0kb downstream 10786 true Chr03: 12839696-12850481 Phaseolus vulgaris
Phvul.003G079600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12849482-12850481 Phaseolus vulgaris
Phvul.003G079600 2.0kb upstream 2.0kb upstream 11786 true Chr03: 12837696-12849481 Phaseolus vulgaris
Phvul.003G079600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12837696-12839695 Phaseolus vulgaris
Phvul.003G079600 2.0kb downstream 2.0kb downstream 11786 true Chr03: 12839696-12851481 Phaseolus vulgaris
Phvul.003G079600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12849482-12851481 Phaseolus vulgaris
Phvul.003G079600 5.0kb upstream 5.0kb upstream 14786 true Chr03: 12834696-12849481 Phaseolus vulgaris
Phvul.003G079600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12834696-12839695 Phaseolus vulgaris
Phvul.003G079600 5.0kb downstream 5.0kb downstream 14786 true Chr03: 12839696-12854481 Phaseolus vulgaris
Phvul.003G079600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12849482-12854481 Phaseolus vulgaris
Phvul.003G079600 10.0kb upstream 10.0kb upstream 19786 true Chr03: 12829696-12849481 Phaseolus vulgaris
Phvul.003G079600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12829696-12839695 Phaseolus vulgaris
Phvul.003G079600 10.0kb downstream 10.0kb downstream 19786 true Chr03: 12839696-12859481 Phaseolus vulgaris
Phvul.003G079600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12849482-12859481 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305741 5265 Fabidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.11494 0.0 15.282    
cufflinks 2.87038 0.0 14.391    
cufflinks 1.38767 0.0 8.55045   Low
cufflinks 2.35942 0.0 10.5491    
cufflinks 2.19957 0.0 11.8492    
cufflinks 2.54659 0.0 13.2512    
cufflinks 2.66729 0.0 13.343    
cufflinks 2.51502 0.0 13.0839    
cufflinks 2.04763 0.0 11.8116    
cufflinks 1.91524 0.0 10.6168    
cufflinks 3.90674 0.0 18.2813   High

0 Strain