Gene : Phvul.003G084900 P. vulgaris v2.1
Genomic Order:  855 Name:  ? Phvul.003G084900
Secondary Identifier:  ? PAC:37147944
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G084900 0.5kb upstream 0.5kb upstream 1551 true Chr03: 14732908-14734458 Phaseolus vulgaris
Phvul.003G084900 0.5kb upstream 0.5kb upstream 500 false Chr03: 14733959-14734458 Phaseolus vulgaris
Phvul.003G084900 0.5kb downstream 0.5kb downstream 1551 true Chr03: 14732408-14733958 Phaseolus vulgaris
Phvul.003G084900 0.5kb downstream 0.5kb downstream 500 false Chr03: 14732408-14732907 Phaseolus vulgaris
Phvul.003G084900 1.0kb upstream 1.0kb upstream 2051 true Chr03: 14732908-14734958 Phaseolus vulgaris
Phvul.003G084900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14733959-14734958 Phaseolus vulgaris
Phvul.003G084900 1.0kb downstream 1.0kb downstream 2051 true Chr03: 14731908-14733958 Phaseolus vulgaris
Phvul.003G084900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14731908-14732907 Phaseolus vulgaris
Phvul.003G084900 2.0kb upstream 2.0kb upstream 3051 true Chr03: 14732908-14735958 Phaseolus vulgaris
Phvul.003G084900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14733959-14735958 Phaseolus vulgaris
Phvul.003G084900 2.0kb downstream 2.0kb downstream 3051 true Chr03: 14730908-14733958 Phaseolus vulgaris
Phvul.003G084900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14730908-14732907 Phaseolus vulgaris
Phvul.003G084900 5.0kb upstream 5.0kb upstream 6051 true Chr03: 14732908-14738958 Phaseolus vulgaris
Phvul.003G084900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14733959-14738958 Phaseolus vulgaris
Phvul.003G084900 5.0kb downstream 5.0kb downstream 6051 true Chr03: 14727908-14733958 Phaseolus vulgaris
Phvul.003G084900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14727908-14732907 Phaseolus vulgaris
Phvul.003G084900 10.0kb upstream 10.0kb upstream 11051 true Chr03: 14732908-14743958 Phaseolus vulgaris
Phvul.003G084900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14733959-14743958 Phaseolus vulgaris
Phvul.003G084900 10.0kb downstream 10.0kb downstream 11051 true Chr03: 14722908-14733958 Phaseolus vulgaris
Phvul.003G084900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14722908-14732907 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780034 5273 Angiosperm View MSA
122312578 5265 Fabidae View MSA
124062224 5270 Rosid View MSA
123744829 5271 Pentapetalae View MSA
122771263 5272 Eudicot View MSA
121051668 5274 Embryophyte View MSA
123091749 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178551 0.0 0.796153 Low  
cufflinks 1.59617 0.0 10.1201   High
cufflinks 0.206806 0.0 0.924017 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.273363 0.0 1.16153 Low  
cufflinks 0.0751229 0.0 0.404455 Low Low
cufflinks 0.234124 0.0 1.00563 Low  
cufflinks 0.0902902 0.0 0.425429 Low  
cufflinks 0.124626 0.0 0.575112 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.12648 0.0 5.28393   High

0 Strain