Gene : Phvul.003G083900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13844//PTHR13844:SF10 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // SUBFAMILY NOT NAMED Genomic Order:  840
Name:  ? Phvul.003G083900 Secondary Identifier:  ? PAC:37148288
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G083900 0.5kb upstream 0.5kb upstream 4159 true Chr03: 14023227-14027385 Phaseolus vulgaris
Phvul.003G083900 0.5kb upstream 0.5kb upstream 500 false Chr03: 14026886-14027385 Phaseolus vulgaris
Phvul.003G083900 0.5kb downstream 0.5kb downstream 4159 true Chr03: 14022727-14026885 Phaseolus vulgaris
Phvul.003G083900 0.5kb downstream 0.5kb downstream 500 false Chr03: 14022727-14023226 Phaseolus vulgaris
Phvul.003G083900 1.0kb upstream 1.0kb upstream 4659 true Chr03: 14023227-14027885 Phaseolus vulgaris
Phvul.003G083900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14026886-14027885 Phaseolus vulgaris
Phvul.003G083900 1.0kb downstream 1.0kb downstream 4659 true Chr03: 14022227-14026885 Phaseolus vulgaris
Phvul.003G083900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14022227-14023226 Phaseolus vulgaris
Phvul.003G083900 2.0kb upstream 2.0kb upstream 5659 true Chr03: 14023227-14028885 Phaseolus vulgaris
Phvul.003G083900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14026886-14028885 Phaseolus vulgaris
Phvul.003G083900 2.0kb downstream 2.0kb downstream 5659 true Chr03: 14021227-14026885 Phaseolus vulgaris
Phvul.003G083900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14021227-14023226 Phaseolus vulgaris
Phvul.003G083900 5.0kb upstream 5.0kb upstream 8659 true Chr03: 14023227-14031885 Phaseolus vulgaris
Phvul.003G083900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14026886-14031885 Phaseolus vulgaris
Phvul.003G083900 5.0kb downstream 5.0kb downstream 8659 true Chr03: 14018227-14026885 Phaseolus vulgaris
Phvul.003G083900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14018227-14023226 Phaseolus vulgaris
Phvul.003G083900 10.0kb upstream 10.0kb upstream 13659 true Chr03: 14023227-14036885 Phaseolus vulgaris
Phvul.003G083900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14026886-14036885 Phaseolus vulgaris
Phvul.003G083900 10.0kb downstream 10.0kb downstream 13659 true Chr03: 14013227-14026885 Phaseolus vulgaris
Phvul.003G083900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14013227-14023226 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300024 5265 Fabidae View MSA
124069703 5270 Rosid View MSA
123745418 5271 Pentapetalae View MSA
122789577 5272 Eudicot View MSA
122051489 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121346122 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67654 0.0 19.8299    
cufflinks 11.2771 0.0 39.7298    
cufflinks 3.05941 0.0 12.5743   Low
cufflinks 6.5361 0.0 22.108    
cufflinks 15.2135 0.0 50.9044    
cufflinks 13.7881 0.0 46.7828    
cufflinks 16.6052 0.0 54.7554    
cufflinks 7.1625 0.0 23.7607    
cufflinks 18.3105 0.0 59.7507    
cufflinks 2.03934 0.0 9.45074   Low
cufflinks 23.9241 0.0 76.5487   High

0 Strain