Gene : Phvul.003G069600 P. vulgaris v2.1
Defline:  (1 of 1) K15151 - mediator of RNA polymerase II transcription subunit 10 (MED10, NUT2) Genomic Order:  708
Name:  ? Phvul.003G069600 Secondary Identifier:  ? PAC:37146337
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G069600 0.5kb upstream 0.5kb upstream 3733 true Chr03: 10498784-10502516 Phaseolus vulgaris
Phvul.003G069600 0.5kb upstream 0.5kb upstream 500 false Chr03: 10498784-10499283 Phaseolus vulgaris
Phvul.003G069600 0.5kb downstream 0.5kb downstream 3733 true Chr03: 10499284-10503016 Phaseolus vulgaris
Phvul.003G069600 0.5kb downstream 0.5kb downstream 500 false Chr03: 10502517-10503016 Phaseolus vulgaris
Phvul.003G069600 1.0kb upstream 1.0kb upstream 4233 true Chr03: 10498284-10502516 Phaseolus vulgaris
Phvul.003G069600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10498284-10499283 Phaseolus vulgaris
Phvul.003G069600 1.0kb downstream 1.0kb downstream 4233 true Chr03: 10499284-10503516 Phaseolus vulgaris
Phvul.003G069600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10502517-10503516 Phaseolus vulgaris
Phvul.003G069600 2.0kb upstream 2.0kb upstream 5233 true Chr03: 10497284-10502516 Phaseolus vulgaris
Phvul.003G069600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10497284-10499283 Phaseolus vulgaris
Phvul.003G069600 2.0kb downstream 2.0kb downstream 5233 true Chr03: 10499284-10504516 Phaseolus vulgaris
Phvul.003G069600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10502517-10504516 Phaseolus vulgaris
Phvul.003G069600 5.0kb upstream 5.0kb upstream 8233 true Chr03: 10494284-10502516 Phaseolus vulgaris
Phvul.003G069600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10494284-10499283 Phaseolus vulgaris
Phvul.003G069600 5.0kb downstream 5.0kb downstream 8233 true Chr03: 10499284-10507516 Phaseolus vulgaris
Phvul.003G069600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10502517-10507516 Phaseolus vulgaris
Phvul.003G069600 10.0kb upstream 10.0kb upstream 13233 true Chr03: 10489284-10502516 Phaseolus vulgaris
Phvul.003G069600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10489284-10499283 Phaseolus vulgaris
Phvul.003G069600 10.0kb downstream 10.0kb downstream 13233 true Chr03: 10499284-10512516 Phaseolus vulgaris
Phvul.003G069600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10502517-10512516 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301301 5265 Fabidae View MSA
124062321 5270 Rosid View MSA
123743947 5271 Pentapetalae View MSA
122790703 5272 Eudicot View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.9684 0.0 86.7548    
cufflinks 25.04 0.0 70.8739    
cufflinks 22.6553 0.0 64.9327    
cufflinks 18.4585 0.0 54.2216   Low
cufflinks 28.7304 0.0 80.8785    
cufflinks 20.1148 0.0 58.5766   Low
cufflinks 28.8141 0.0 80.6839 High  
cufflinks 23.966 0.0 67.9826    
cufflinks 30.1633 0.0 84.3106 High  
cufflinks 30.1354 0.0 84.8856    
cufflinks 29.6571 0.0 83.3927    

0 Strain