Gene : Phvul.003G074200 P. vulgaris v2.1
Defline:  (1 of 3) K18156 - mitochondrial inner membrane protease ATP23 [EC:3.4.24.-] (ATP23, XRCC6BP1) Genomic Order:  748
Name:  ? Phvul.003G074200 Secondary Identifier:  ? PAC:37144652
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G074200 0.5kb upstream 0.5kb upstream 8600 true Chr03: 11659073-11667672 Phaseolus vulgaris
Phvul.003G074200 0.5kb upstream 0.5kb upstream 500 false Chr03: 11667173-11667672 Phaseolus vulgaris
Phvul.003G074200 0.5kb downstream 0.5kb downstream 8600 true Chr03: 11658573-11667172 Phaseolus vulgaris
Phvul.003G074200 0.5kb downstream 0.5kb downstream 500 false Chr03: 11658573-11659072 Phaseolus vulgaris
Phvul.003G074200 1.0kb upstream 1.0kb upstream 9100 true Chr03: 11659073-11668172 Phaseolus vulgaris
Phvul.003G074200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11667173-11668172 Phaseolus vulgaris
Phvul.003G074200 1.0kb downstream 1.0kb downstream 9100 true Chr03: 11658073-11667172 Phaseolus vulgaris
Phvul.003G074200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11658073-11659072 Phaseolus vulgaris
Phvul.003G074200 2.0kb upstream 2.0kb upstream 10100 true Chr03: 11659073-11669172 Phaseolus vulgaris
Phvul.003G074200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11667173-11669172 Phaseolus vulgaris
Phvul.003G074200 2.0kb downstream 2.0kb downstream 10100 true Chr03: 11657073-11667172 Phaseolus vulgaris
Phvul.003G074200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11657073-11659072 Phaseolus vulgaris
Phvul.003G074200 5.0kb upstream 5.0kb upstream 13100 true Chr03: 11659073-11672172 Phaseolus vulgaris
Phvul.003G074200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11667173-11672172 Phaseolus vulgaris
Phvul.003G074200 5.0kb downstream 5.0kb downstream 13100 true Chr03: 11654073-11667172 Phaseolus vulgaris
Phvul.003G074200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11654073-11659072 Phaseolus vulgaris
Phvul.003G074200 10.0kb upstream 10.0kb upstream 18100 true Chr03: 11659073-11677172 Phaseolus vulgaris
Phvul.003G074200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11667173-11677172 Phaseolus vulgaris
Phvul.003G074200 10.0kb downstream 10.0kb downstream 18100 true Chr03: 11649073-11667172 Phaseolus vulgaris
Phvul.003G074200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11649073-11659072 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313422 5265 Fabidae View MSA
124065065 5270 Rosid View MSA
123736849 5271 Pentapetalae View MSA
122796958 5272 Eudicot View MSA
122045264 5273 Angiosperm View MSA
121345086 5274 Embryophyte View MSA
123426111 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12317 0.0 20.2227    
cufflinks 5.69704 0.0 28.3896   High
cufflinks 2.84935 0.0 15.365   Low
cufflinks 3.90638 0.0 12.3431    
cufflinks 3.63454 0.0 18.3297    
cufflinks 2.61734 0.0 12.7702   Low
cufflinks 3.76693 0.0 18.5944    
cufflinks 3.77566 0.0 18.3123    
cufflinks 4.00617 0.0 18.9712    
cufflinks 6.26571 0.0 29.6056   High
cufflinks 4.07164 0.0 20.2007    

0 Strain